Protein

View in Explore
Genbank accession
YP_007677152.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MATTEHFYTGNNSTTSFAFTFPYLSNSDVKVELDNVVKTENSSGQTNNDYTINNTNIVFNSAPGTGVAIHIYRTTNVDSAQAQYAAGSSIRAADLNNNQTQLLYSAQEASGQLIRQGDLKDSIINSAKIVDGSVATGDLADGLITTVKIAADAVTGAKIADDQINSEHYIDASIDTQHIADSQITTAKIANSNVTTAKIADSNVTTAKIAADAITGAKIADDQINSEHYVDGSIDTAHIANSQITSAKIADGTIIAGDLASNAVTTAKITDLNVTTAKIAADAITGAKIADDQINSEHYVDGSIDTAHIGNNQVTTAKIAADAVTNAKIADDQIDSEHYVDGSIDTAHIGGSQVTDAKLASNSVTTSKIADGQVTTVKISNGDVTLAKLANDLKQTTISDSDTQLPTSGAVVDYVAAQLQPFGGFEAVATEVAFPNTQPVSGVAISISDAGGVVVNGSGVSTTGRTVGGSTITINGFPSSLYNETLVAGVGLIVTSTGSSQTYNYHKILGKEDDIKQLSDDINDFNARYRVGSSNPSSALDSGDLFFNTSTGKLLVYNGTNSAWEEAQSIGNYYINTISSYSGTGGNSASFNGSAYRFVLSNPGTTAEQHIVSVNGVVQKPNSGTSQPGEGFAIDGSSIIFSSAPASGSDFFIITIGSTVNIGTPSDNTVTTAKLTSGAVTTVKIADDAVTAAKIADNLDLPDGNKIRFGTGNDLSIEHDGNHSYINEQGTGDLFVQSNGGSISFQKFGTLERLANFITDGAVELFHDSSKKIETTSWGAQVSGNFVATGLIDLADGNGTSTSTIALGDSDDLKIYHDGSHSYIKNGTGNLNIRTGGTLWIDNSAGTETYIKAIENEAVQLYYDNSKKFETTNLGAQITGELSLTTHLKLLDNQKVVCGNGEDLLIYHDGTHNYVNFVTGALIFQNNGTSVAYFHNTDGHFLPWTTNTFDLGSSGNRWRNVYTNDLHLSNEGSSNDVDSTWGDWTIQEGESDLFLKNNRSGKKYKFNLTEVL
Physico‐chemical
properties
protein length:1012 AA
molecular weight: 106303,56780 Da
isoelectric point:4,54424
aromaticity:0,07016
hydropathy:-0,24447

Domains

Domains [InterPro]
DC_0245
STR
1–299
DC_0245 DC_1614 DC_1194
IPR005604
ATT
8–111
IPR005604 IPR052671
DC_0127
STR
288–357
DC_0127
YP_007677152.1
1 1012
Architecture
ATT
STR
ATT 1-111 | STR 112-1012
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSP3
[NCBI] 		382273 Uroviricota > Caudoviricetes > Autographivirales > Tritonvirus > Tritonvirus PSSP3
Host Prochlorococcus marinus
[NCBI] 		1219 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007677152.1 [NCBI]
Genbank nucleotide accession
NC_020874 [NCBI]
CDS location
range 9545 -> 12583
strand -
CDS
ATGGCGACAACTGAACATTTTTATACAGGCAATAACTCCACAACGAGTTTTGCCTTTACATTTCCATATTTATCAAACAGCGATGTCAAAGTAGAACTTGACAACGTTGTAAAAACTGAAAACTCAAGTGGTCAAACAAACAATGACTACACCATAAACAATACAAACATTGTATTTAATAGTGCTCCGGGAACTGGAGTAGCTATTCATATTTATAGAACAACTAACGTAGACTCAGCTCAGGCACAATATGCAGCTGGTTCATCAATACGTGCAGCTGACTTAAATAATAACCAAACACAATTACTGTACTCAGCTCAAGAAGCTAGTGGACAATTAATAAGACAAGGAGATTTAAAAGATTCTATAATAAACTCTGCAAAAATAGTTGATGGTTCTGTTGCAACAGGAGACTTAGCAGATGGTCTTATAACAACTGTTAAGATTGCTGCTGATGCAGTAACTGGAGCTAAGATTGCAGATGATCAGATTAACTCTGAGCATTATATTGATGCTTCTATTGATACTCAACATATAGCTGATAGTCAGATAACAACTGCAAAAATAGCTAACAGTAATGTAACCACAGCTAAGATTGCTGACTCAAATGTAACTACAGCCAAAATAGCTGCTGATGCTATTACTGGTGCAAAGATAGCTGATGACCAGATAAACTCTGAGCATTATGTAGACGGAAGTATAGATACTGCTCATATAGCTAATAGTCAAATTACTTCAGCTAAAATTGCAGACGGTACTATTATTGCTGGAGATTTAGCAAGTAATGCTGTTACTACAGCTAAAATTACTGATTTAAATGTTACTACAGCCAAAATAGCAGCTGATGCAATTACTGGAGCTAAAATTGCTGACGATCAAATTAACTCAGAACATTATGTTGATGGGTCAATTGATACAGCACATATTGGAAACAATCAAGTTACTACAGCTAAGATTGCAGCAGATGCAGTTACAAATGCAAAAATAGCTGACGATCAAATTGATTCTGAACATTACGTAGACGGATCTATTGATACAGCTCATATAGGTGGTTCTCAGGTTACAGATGCAAAGCTTGCGTCTAACTCAGTAACAACATCTAAAATTGCTGATGGTCAAGTAACTACAGTTAAGATATCTAACGGAGACGTAACCCTTGCTAAACTAGCGAATGATCTAAAACAAACAACTATATCTGATAGTGATACACAGTTACCAACATCCGGAGCTGTTGTTGATTATGTTGCTGCACAATTACAACCATTTGGTGGATTTGAAGCAGTAGCTACAGAAGTAGCATTTCCTAATACACAACCAGTTAGCGGTGTAGCTATATCTATATCAGATGCTGGAGGAGTAGTAGTTAATGGTTCTGGAGTTAGTACAACTGGTAGAACAGTAGGCGGCTCAACCATAACTATTAATGGATTTCCATCTAGTTTATATAACGAAACATTAGTAGCTGGAGTAGGTTTAATAGTTACTTCTACAGGATCTAGTCAGACATATAATTACCATAAAATACTTGGTAAGGAAGATGATATTAAACAACTTAGTGATGATATAAATGACTTTAACGCAAGGTATAGAGTTGGGTCGTCAAACCCTTCAAGTGCTCTTGATAGTGGTGATTTATTCTTTAATACTAGCACAGGTAAATTACTTGTATATAATGGAACTAATAGTGCATGGGAAGAAGCACAAAGTATAGGTAATTATTATATAAATACAATATCCAGCTATTCTGGTACAGGAGGAAATAGTGCATCATTTAATGGTTCTGCTTACAGATTTGTTCTTTCCAATCCGGGAACTACAGCAGAACAACATATTGTTTCTGTCAATGGAGTCGTTCAGAAACCTAACTCAGGTACAAGTCAACCCGGCGAAGGATTTGCTATTGATGGTAGTTCTATCATATTTAGCTCCGCTCCTGCTAGTGGTTCTGATTTCTTCATCATTACAATCGGATCAACAGTAAATATTGGTACACCAAGTGATAATACAGTTACAACTGCTAAACTTACAAGTGGTGCAGTAACTACAGTTAAGATTGCAGATGATGCAGTTACAGCAGCTAAGATTGCAGATAATTTAGATCTTCCAGATGGTAATAAAATTAGATTTGGTACTGGTAATGATTTATCTATCGAACATGATGGAAACCATAGTTACATAAATGAACAAGGAACTGGAGATTTATTTGTTCAAAGTAATGGTGGTTCAATATCTTTTCAAAAATTTGGAACACTTGAAAGACTAGCAAATTTTATTACAGATGGAGCGGTTGAGCTCTTTCATGACAGCAGTAAAAAGATAGAAACAACCAGTTGGGGTGCTCAAGTAAGTGGCAATTTTGTTGCAACTGGACTTATAGATTTAGCAGATGGTAATGGTACTAGTACTTCTACAATTGCTCTTGGAGATAGTGATGACCTAAAAATTTATCACGATGGAAGCCATAGTTATATAAAAAATGGTACTGGTAATCTAAATATCCGAACTGGCGGTACTCTATGGATAGATAACTCTGCAGGAACTGAAACATATATTAAAGCTATTGAAAATGAGGCCGTACAGTTATATTACGACAACAGTAAAAAGTTTGAGACAACTAACTTAGGAGCACAAATTACTGGAGAGTTATCATTAACAACTCATCTAAAACTTCTTGATAATCAGAAAGTTGTTTGTGGAAATGGAGAAGATCTACTTATCTACCATGATGGAACCCATAATTATGTAAATTTTGTAACTGGAGCATTAATATTTCAAAATAATGGTACAAGTGTAGCATATTTTCATAATACCGATGGTCATTTCTTACCTTGGACAACTAATACATTTGACTTAGGTTCATCAGGTAATCGTTGGAGAAACGTCTACACCAATGACCTTCACTTATCTAACGAAGGTTCATCTAATGATGTTGATTCAACTTGGGGTGACTGGACAATACAGGAAGGAGAATCAGACTTGTTCTTAAAAAATAACCGTTCTGGTAAAAAGTATAAATTTAATTTAACGGAGGTATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
67acbce3b862e0f240327238eeb51d1968fb386ce55bac221a07d2335c965f0f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6304
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSP3 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank