Protein

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Genbank accession
ALM64077.1 [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MTIKNFTFFSPNGTEFPVGSNNDGKLYMMLTGMDYGTIRRKDWTSPLNTALNVQYTNTSIIAGGRYFELSNETVALKGNSVNYIHANIDLTQTAHPVSLSAETINNSNHVDLNNSSGVLKVLIDIRTTNGLGVISSEIPKQITTLDELATKTAKIEDLTVKGDIKGWTSVSMQNVASATLQYKKINGVICLRGSGNWGAFKANSTKVVGSLPPEVRPTDNTQFEMTTQRANNNNKPMELLIDTNGTISVWSYSAGSGNYGGVVGTYFQ
Physico‐chemical
properties
protein length:268 AA
molecular weight: 29092,36040 Da
isoelectric point:7,77406
aromaticity:0,07836
hydropathy:-0,28955

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–139
G3DSA:2.60.520.10
G3DSA:2.60.520.10
STR
1–135
G3DSA:2.60.520.10 DC_0707
SSF141658
STR
2–139
SSF141658
IPR048780
RBD
2–137
IPR048780
ALM64077.1
1 268
Architecture
STR
RBD
STR 1-139 | RBD 140-268
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALM64077.1
1 268
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9641
Central domain 156 257 103 0,0016
C-terminal 258 268 10 0,9979
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-257
C-terminal
258-268

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 936 group phage PhiL.6
[NCBI] 		1636582 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALM64077.1 [NCBI]
Genbank nucleotide accession
KP793122 [NCBI]
CDS location
range 15626 -> 16432
strand +
CDS
ATGACAATTAAAAACTTTACATTCTTTAGTCCAAATGGTACAGAGTTTCCGGTAGGTTCAAACAATGACGGAAAGCTATACATGATGTTGACAGGAATGGACTACGGAACTATTAGGCGCAAAGACTGGACAAGTCCGTTAAATACAGCTCTTAATGTACAATATACCAATACTTCAATTATTGCTGGCGGTAGATATTTTGAGCTATCAAACGAAACGGTAGCGTTAAAGGGCAATTCTGTAAACTATATTCATGCAAATATCGACCTAACGCAAACAGCACACCCTGTAAGTTTATCGGCTGAAACTATAAATAATAGCAACCATGTCGACTTAAATAATAGTTCTGGTGTCCTAAAGGTTTTGATTGATATCAGAACGACTAATGGTTTAGGGGTAATCAGTTCTGAAATACCAAAACAAATAACTACATTGGACGAATTAGCAACAAAGACAGCTAAAATTGAAGACTTGACAGTCAAAGGAGATATCAAGGGCTGGACTAGCGTTTCAATGCAAAACGTAGCTAGTGCAACTCTTCAATATAAAAAAATTAACGGTGTCATTTGTTTACGTGGTTCAGGAAACTGGGGTGCCTTTAAAGCAAATTCTACAAAAGTTGTCGGAAGTTTGCCACCAGAAGTAAGACCAACTGATAACACTCAATTTGAAATGACAACACAACGTGCAAATAACAACAATAAACCAATGGAACTACTAATAGACACTAACGGTACGATAAGCGTATGGAGTTACTCTGCTGGTTCAGGTAACTATGGCGGTGTCGTAGGGACATATTTCCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5e30e6970ce0246266183ff16c1b29ecc3574b8864b0de373c657980e1856afb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7656
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50