Protein

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Genbank accession
YP_009287675.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,69
Seq2Symm
C3 confidence 0,436
C3 0,436
C1 0,350
C2 0,056
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MDSTINGKTVHINNPLDLIGLGRREIEFNIHKADYWEMFKETMQVPTMKRGGYKNLLKGGWVFVDPFNQGKDLWTKDYFTKSGGMVWQTFGPSGDIFDYGTYESGYYNFKCPDTKDFEDYTKYAQINFLKPNTTYTWQWDMKRTTSSIKGDMETFMGTGGSTIIDLTKPVYVNGETYQQAENSADGFVSWNRRINSEDTDWHKCVFVFTTKSTLPNTGSLSLRWRAKKDSSWKVKNIMMFDGSELLGTDFRLHDEEYYDWTFYEGKQGMREVSANFGFYYSEDYAFCSAFKVNIHKGFETRGFNPVTQEFECKAEVENFAQIVNPTIKYYQDIKQIPDDVNWDNTIIYNPKPNGIDYLQCKAKGNYMSLYKVRNDNYSSYVPKRWQATFFDSVPSRKWLYGGYCYTGILQTYEIEN
Physico‐chemical
properties
protein length:416 AA
molecular weight: 48684,92870 Da
isoelectric point:5,71666
aromaticity:0,17067
hydropathy:-0,70433

Taxonomy

Phage
Lactococcus phage M5938 [NCBI] · taxon 1862960
Uroviricota Caudoviricetes Ceduovirus Ceduovirus M5938
Host
Lactococcus lactis [NCBI] · taxon 1358
Bacillota Bacilli Lactobacillales Streptococcaceae Lactococcus Lactococcus lactis

Coding sequence (CDS)

Genbank protein accession
YP_009287675.1 [NCBI]
Genbank nucleotide accession
NC_031075 [NCBI]
CDS location
range 20514 -> 21764
strand +
CDS
ATGGATAGTACAATAAACGGTAAAACGGTACATATAAATAACCCATTAGACCTTATAGGCTTAGGACGTAGGGAAATCGAGTTTAACATTCATAAAGCAGATTATTGGGAAATGTTCAAAGAAACTATGCAAGTACCTACAATGAAACGTGGAGGATATAAAAACTTGCTCAAAGGTGGTTGGGTATTTGTTGACCCTTTTAACCAAGGGAAAGACTTATGGACTAAAGACTACTTCACAAAATCAGGTGGAATGGTATGGCAAACTTTTGGACCGAGCGGAGATATTTTTGATTATGGCACTTATGAAAGTGGGTATTATAATTTTAAGTGTCCTGATACTAAAGACTTCGAAGACTATACCAAGTACGCTCAAATAAACTTTTTAAAGCCTAACACCACTTACACTTGGCAATGGGACATGAAGCGAACGACTTCCTCTATAAAAGGAGATATGGAAACTTTCATGGGAACAGGTGGTAGCACTATTATTGACTTAACTAAACCTGTTTATGTTAATGGAGAAACGTATCAACAGGCAGAAAATAGTGCTGACGGTTTCGTTAGTTGGAATAGAAGAATAAATAGCGAAGATACAGATTGGCATAAATGTGTTTTCGTATTCACTACTAAATCAACTTTACCAAATACAGGTTCACTCTCCTTACGTTGGAGAGCTAAAAAAGACAGTTCATGGAAAGTAAAAAATATTATGATGTTCGATGGTTCTGAATTATTAGGGACTGATTTCAGATTACACGATGAAGAGTATTATGATTGGACTTTCTATGAGGGCAAACAAGGTATGCGTGAAGTGTCAGCTAACTTTGGTTTTTATTACAGCGAAGACTATGCCTTTTGTTCAGCATTCAAAGTTAATATACATAAAGGATTTGAAACAAGAGGTTTCAACCCAGTTACACAAGAGTTTGAATGTAAAGCAGAAGTAGAGAACTTTGCACAAATTGTCAACCCTACAATCAAATACTATCAGGATATTAAGCAAATACCTGATGACGTGAATTGGGATAATACTATCATATACAATCCTAAGCCGAACGGAATAGACTACTTACAATGTAAAGCTAAAGGGAACTATATGAGCTTATACAAAGTCAGAAATGATAATTATAGTTCATACGTCCCTAAACGTTGGCAAGCTACATTTTTTGATTCAGTTCCTAGTAGAAAATGGTTGTATGGTGGTTACTGTTATACTGGTATACTACAAACTTATGAGATAGAAAACTAA

Genome Context

Tertiary structure

YP_009287675.1
ESMFold2 structure
Source ESMFold2
pLDDT 50.9
Oligomeric state monomer
Download structure