Protein

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Genbank accession
YP_009303388.1 [GenBank]
Protein name
head scaffolding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MANENVAVYEPGQDISGRCSAGVTGKRFLKISGNRSSGNVAVAHADAGGRICGVSGRDAASGELVRVMRGSGRVVFVTAAANLAAFQEVEVGTNGQAIVKASGVAVGYAVTAATSGGDAEINLY
Physico‐chemical
properties
protein length:124 AA
molecular weight: 12360,67900 Da
isoelectric point:7,79747
aromaticity:0,04839
hydropathy:0,15000

Domains

Domains [InterPro]
DC_2156
STR
1–124
DC_2156
IPR011231
STR
39–118
IPR011231
YP_009303388.1
1 124
Architecture
STR
STR 1-124
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009303388.1
1 124
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0008
Central domain 11 113 104 0,0007
C-terminal 114 124 10 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-113
C-terminal
114-124

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Schnabeltier
[NCBI] 		1821561 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009303388.1 [NCBI]
Genbank nucleotide accession
NC_031255 [NCBI]
CDS location
range 5040 -> 5414
strand +
CDS
ATGGCCAACGAGAACGTCGCGGTCTACGAACCCGGCCAGGACATCTCCGGCCGCTGCTCGGCCGGGGTGACCGGCAAGCGGTTCCTCAAGATCTCCGGCAACCGCTCCAGCGGCAACGTCGCCGTCGCGCACGCCGACGCCGGCGGCCGCATCTGCGGTGTGTCCGGACGGGATGCCGCCAGCGGTGAGCTGGTGCGGGTCATGCGCGGCTCGGGGCGCGTCGTCTTCGTGACGGCCGCCGCGAACCTCGCTGCGTTCCAGGAGGTCGAGGTCGGCACGAATGGCCAGGCCATCGTCAAGGCATCGGGCGTGGCCGTCGGCTACGCCGTCACCGCAGCAACCAGCGGCGGCGACGCCGAGATCAACCTGTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ec628836262435dc8d6a7aad7b7ef95429d0f9938a908d88f0490375811f7b6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8788
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50