Protein

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Genbank accession
AGG58276.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSVTINPVHGQAVTEVVNTGGLSIIEVVERGPQGIPGDNILAAVSDWNPETKYKLNQKVAYLDAIYNASVDVVPAGTLPTDENFWSNITGKITEVEYTQTVASGDIWAVDGVGSSLSDFNDAKIQIWYNGIKLRKGTQANWVSSTEITIPFSATELIDYLVIRNG
Physico‐chemical
properties
protein length:165 AA
molecular weight: 17859,76990 Da
isoelectric point:4,39442
aromaticity:0,08485
hydropathy:-0,05030

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage henriette 12B8
[NCBI] 		573174 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG58276.1 [NCBI]
Genbank nucleotide accession
HQ316582.1 [NCBI]
CDS location
range 67874 -> 68371
strand -
CDS
ATGAGCGTAACTATAAACCCAGTACATGGGCAAGCAGTAACAGAAGTAGTGAATACTGGTGGCCTCTCTATTATCGAAGTGGTCGAAAGAGGTCCACAAGGTATTCCCGGTGATAATATTTTGGCCGCAGTGTCTGATTGGAACCCAGAAACTAAATACAAATTAAACCAGAAAGTGGCATACCTAGATGCAATATATAACGCATCAGTTGATGTAGTTCCTGCTGGCACATTACCAACTGATGAAAATTTTTGGAGCAATATTACCGGAAAAATAACTGAAGTCGAATACACACAAACTGTGGCATCCGGTGATATATGGGCTGTTGATGGTGTCGGGTCTTCTTTATCCGATTTTAATGATGCAAAAATACAAATATGGTATAACGGTATTAAATTAAGGAAGGGTACACAAGCTAATTGGGTAAGCTCTACTGAAATTACTATACCATTTAGTGCTACTGAGTTAATTGATTATTTAGTTATACGTAACGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
36b52dc11be2768fd3a7809fed44030b5afed6ccc0a8838513be82c9c398cb96
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6727
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage henriette 12B8 Henn,M.R., Polz,M., Kauffman,A.K.M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank