Protein

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Genbank accession
YP_004324867.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAKQGLLAQLKPSANTDTVLYSAPINRSASTVLTIANDGTGSAYDVAVKNYDQKFTLDAATYKLHAGDLISSSVVEVGTPIPASVSLTVGDTITTTDKEKSFKFESFYIPTFTEIFVKVFAIRAVPVESVSGTFAAGNTISKGSSPNDTTAVVYGVDGTTIHIGPSTLNGTGTEFAAGDSIGVSGGASATISASPAITAANNEFTFSTTTAGGVYRLYVGDGNLFELFDDRTYRFNVADGTMSGRDFHLSETVNGEFGPDGAVGGGDDGTEFTTGKTTNGTAGSGGAYVQYAFGGNTTPTTLYIYDGGTGTASNANYGGVDRFLRFNESYTYPGVYVFDKVGTIVDNTDTFLISDVTYTITSQTAGAYGYVRDYTGSVLTFIKGLNSGDFSGSDTFRDVPKLNTASRTTATINSVDVASAAVEVSNYLVDGDATGNNEVDKITSLVVGPGETIVVKSTTANNIFSLVGFEDASSSITTRIFGQS
Physico‐chemical
properties
protein length:484 AA
molecular weight: 50282,45810 Da
isoelectric point:4,40010
aromaticity:0,10331
hydropathy:-0,05413

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM7
[NCBI] 		445688 Uroviricota > Caudoviricetes > Pantevenvirales > Palaemonvirus > Palaemonvirus pssm7
Host Prochlorococcus marinus str. NATL1A
[NCBI] 		167555 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004324867.1 [NCBI]
Genbank nucleotide accession
NC_015290.1 [NCBI]
CDS location
range 24660 -> 26114
strand +
CDS
ATGGCTAAACAAGGACTTCTAGCACAACTTAAACCATCTGCTAACACTGATACGGTGTTATACTCAGCACCTATTAATAGGAGTGCTAGTACGGTGTTGACGATTGCCAATGACGGAACAGGTTCCGCTTATGATGTGGCAGTAAAGAATTATGATCAAAAATTTACTCTTGATGCTGCAACATATAAACTTCACGCAGGTGATTTGATATCATCTTCTGTTGTTGAAGTTGGAACTCCAATTCCAGCAAGTGTATCACTTACTGTTGGTGATACAATTACTACAACCGATAAGGAAAAATCATTTAAATTTGAATCATTTTATATTCCTACATTTACAGAAATTTTTGTCAAAGTATTTGCCATTAGAGCAGTTCCTGTAGAGTCTGTTAGTGGAACATTTGCTGCTGGTAATACAATTAGTAAAGGTAGTTCTCCTAACGATACTACTGCGGTTGTATATGGTGTAGATGGTACGACTATTCATATTGGTCCTTCTACACTTAATGGAACTGGAACTGAATTTGCTGCAGGTGATAGCATAGGTGTTTCTGGTGGTGCTTCTGCAACTATCTCAGCATCACCTGCTATTACTGCTGCAAATAATGAATTTACATTCTCAACTACAACTGCTGGTGGAGTTTACAGACTTTATGTTGGAGATGGAAATCTCTTTGAACTTTTTGATGATCGTACTTATAGATTTAATGTTGCAGATGGAACCATGAGTGGTAGAGATTTTCATCTCTCCGAAACTGTTAATGGTGAATTTGGTCCTGATGGTGCAGTAGGTGGTGGTGATGATGGTACAGAATTTACCACAGGTAAAACTACCAATGGTACTGCTGGATCAGGTGGTGCATATGTACAATATGCTTTTGGAGGCAACACAACTCCAACAACTTTATACATTTATGATGGTGGAACAGGTACTGCATCGAATGCTAATTATGGTGGTGTTGATAGATTCCTTCGTTTCAATGAATCTTATACCTATCCTGGAGTTTATGTCTTTGACAAAGTAGGTACTATCGTTGATAATACTGATACTTTCCTTATAAGTGATGTTACTTATACTATTACCAGTCAAACTGCTGGTGCTTATGGATATGTTAGAGACTATACTGGTAGTGTTTTGACGTTTATTAAGGGACTTAATTCTGGTGACTTTTCTGGTTCAGATACGTTTAGGGATGTTCCTAAACTAAACACTGCATCTAGAACTACTGCAACTATTAATAGTGTTGATGTTGCTTCTGCGGCGGTAGAGGTATCTAATTATCTTGTTGATGGTGATGCTACTGGTAATAATGAAGTAGATAAAATTACTTCATTAGTTGTTGGACCTGGTGAAACAATTGTTGTAAAATCAACAACCGCAAATAATATATTCAGTTTAGTTGGTTTTGAAGATGCTTCATCTTCAATTACGACTAGGATATTTGGTCAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
91ef8ce5294e21aed36970b45008cc260d4380c02ed0f13d41bcecbcf415c032
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4905
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage NATL1A-15 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank