Phage RBP Database

Genbank accession

XPO96701.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,96

Seq2Symm

C3 confidence 0,999

C3	0,999
D3	0,001
C1	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MDQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERIVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPQDDAGNLDARNRRIVRLAPGIDGTDAINKNQLDTTLGEAGGILSEIKEEKSDFYDYLTKFADDTALVRGVAWVYNGGLAVGGETTVIINKPTKVFAVPYIEVNGSRQEVGYHYSFDATTQTITLVKPLEAGDFLVAMTTESSVPLEALLGSTVGASSIGMASGHTVQEAFDAMNSVSILEWHSAPYQNFGAALEAAANRAMANGRGTVVIPAGRYTSERTANITMTKGLRLVFAPDAWVTCYNPHDVVNIDINKQHLNITANGARIMAEWDLAVPSSAFAAVRLKDDTLDKSCSITDLKVGFKAGGGKFGWAMHCTAVNLSTFYRCLLQGEYGLHIEASKDRGDYAHAMGNQIVGCEIFTTYDAVTINNHGKFGCEGLLIHGCEFMSANTCIRIADVGLTDTNYLPPLFRIEGNHLNSYQALFCQNVVRLSFIHNDVQARHTTGMTPRGMLELGGVQGFQHHFNTYSSSRVGTGVNADKATPVFQFNSRLPNAYFISSNNNYWCDGMTNPVYGFETTAGSTIIRSTGEILQSAASWTTSDYFQYFRPDDKTIIGNAGATVGLGRIAQATLSGGTVTISRAPAVGNMYTFSTSVIPNSTNITQFTCPEILVGKQITIKLDAAEVTLTHSNNLVCPDWKSTKMWLPNVISVYFLNTTQAIVTGITDVNSTSHMDITTAPTSRNSPGYHGARFLDAANKFYYQFIGGYGWIRHKFEDF

Physico‐chemical properties

protein length:	833 AA
molecular weight:	91165,58320 Da
isoelectric point:	5,81766
aromaticity:	0,09724
hydropathy:	-0,12749

Domain architecture

XPO96701.1

1 833 aa

ATT 3–127 · STR 307–633 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604 IPR012334

IPR011050
STR

IPR011050

XPO96701.1

1833 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0225
ATT

DC_0225 DC_1079

XPO96701.1

1833 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	3	127	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
IPR012334	STR	IPR012334	307	633	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	309	515	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XPO96701.1

1 833 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	299	299	0,9926
Central domain	300	683	385	0,9674
C-terminal	684	833	149	0,9846

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Klebsiella phage KA1-1 [NCBI] · taxon 3385243

Klebsiella phage KA1-1

Host

Klebsiella aerogenes [NCBI] · taxon 548

Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella aerogenes

Genbank protein accession

XPO96701.1 [NCBI]

Genbank nucleotide accession

PQ571294.1 [NCBI]

CDS location

range 6971 -> 9472
strand +

CDS

ATGGACCAAGACATTAAAACAGTCATTCAGTACCCAGTAGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTATCAGATGACAACCGCCGACTGCTGAGTAACATCACTGAGTACCGCTATGTGTCTAAGACCAGAGTGAAACTCCTTGTGGAAACAACGGGATTCGATCGGGTGGAAATCCGTAGGTTCACCTCAGCGTCTGAGCGCATCGTTGACTTCAGCGACGGCTCGGTTCTCCGCGCTAACGACCTCAATGTGTCCCAACTCCAATCAGCACACATAGCTGAAGAGGCCAGAGACGCAGCCCTGCTGGCTATGCCTCAGGATGACGCTGGGAACCTCGACGCCCGCAATCGGAGAATCGTCCGGTTAGCCCCGGGTATCGATGGGACCGACGCTATCAACAAGAACCAGCTGGATACGACTTTAGGTGAAGCTGGTGGAATCCTCTCAGAGATTAAAGAAGAGAAGTCAGACTTCTACGACTACCTCACCAAGTTCGCTGACGACACCGCTCTGGTTCGTGGGGTTGCTTGGGTGTACAACGGAGGGTTGGCTGTAGGTGGTGAGACCACGGTGATTATCAATAAGCCTACCAAGGTCTTCGCTGTGCCGTACATTGAAGTGAACGGCAGTCGCCAAGAGGTTGGCTATCATTACTCCTTCGACGCAACCACTCAGACTATCACTCTGGTTAAACCTCTGGAGGCCGGGGACTTCCTCGTAGCGATGACCACTGAATCAAGCGTACCTCTCGAAGCGCTCCTAGGGTCAACCGTGGGTGCATCCTCTATTGGGATGGCTAGTGGACACACCGTGCAGGAAGCTTTCGATGCGATGAACTCAGTGTCAATCCTTGAGTGGCACAGCGCTCCCTATCAGAACTTCGGTGCTGCCCTTGAGGCTGCGGCTAACCGAGCGATGGCTAACGGGCGTGGTACCGTGGTAATCCCAGCAGGACGCTACACGTCTGAACGTACAGCCAACATCACGATGACCAAAGGTCTCCGTCTGGTGTTCGCCCCGGATGCATGGGTAACCTGCTACAACCCGCATGACGTTGTCAACATCGACATCAACAAGCAGCACCTGAACATCACCGCTAACGGTGCACGCATCATGGCTGAATGGGACCTCGCGGTACCTTCCAGTGCGTTCGCTGCGGTGCGTCTTAAGGATGACACCTTGGACAAGTCCTGCTCCATTACGGACCTGAAGGTGGGCTTTAAGGCTGGTGGCGGCAAGTTCGGATGGGCGATGCACTGTACCGCAGTGAACCTCTCGACGTTCTATCGGTGCCTCTTGCAGGGTGAGTATGGTCTGCATATCGAAGCCTCTAAGGACCGTGGCGATTACGCCCACGCGATGGGTAACCAGATTGTCGGCTGTGAAATCTTCACGACCTACGATGCAGTGACCATTAACAACCACGGTAAGTTCGGCTGTGAGGGTCTCCTGATTCACGGCTGTGAGTTCATGAGCGCCAACACGTGTATTCGAATTGCTGACGTAGGCCTGACAGATACCAACTATCTGCCTCCGCTGTTCCGCATTGAGGGTAACCACCTAAACAGCTACCAAGCGTTGTTCTGCCAGAACGTAGTGCGCCTGTCGTTCATCCATAATGATGTCCAAGCGCGGCACACCACTGGTATGACTCCTCGCGGTATGCTTGAGCTGGGAGGTGTCCAAGGGTTCCAGCACCACTTCAATACGTACTCTTCGAGCCGCGTAGGGACTGGTGTCAACGCTGATAAGGCCACCCCGGTCTTCCAGTTCAACTCTCGGTTACCTAACGCATACTTCATTAGCTCCAATAACAACTATTGGTGTGACGGTATGACCAACCCGGTGTATGGCTTCGAGACCACAGCAGGCTCTACCATTATCCGCTCCACTGGTGAAATCCTCCAGTCTGCGGCATCGTGGACCACTTCGGACTACTTCCAGTATTTCAGACCTGATGACAAAACCATCATCGGGAACGCTGGGGCAACCGTTGGTCTAGGACGAATCGCACAGGCCACTCTGTCAGGCGGTACGGTGACAATCTCCCGCGCGCCCGCTGTTGGTAACATGTATACCTTCAGTACCTCAGTGATACCGAACTCGACGAACATCACGCAGTTCACCTGTCCTGAGATTCTCGTAGGGAAGCAAATCACCATCAAGCTGGATGCAGCTGAGGTGACCCTGACCCACTCGAACAACCTTGTGTGCCCGGACTGGAAGAGCACAAAGATGTGGTTACCTAACGTAATCTCAGTGTACTTCCTCAACACCACACAAGCAATCGTGACTGGAATCACTGACGTTAACTCAACGTCCCACATGGACATCACTACGGCACCGACTAGCCGCAACTCTCCGGGCTATCACGGCGCTCGATTCCTTGATGCGGCCAACAAGTTTTACTACCAGTTCATCGGTGGTTATGGTTGGATTCGCCATAAGTTCGAAGACTTCTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)