Phage RBP Database

Genbank accession

XPO96701.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,96

Protein sequence

MDQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERIVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPQDDAGNLDARNRRIVRLAPGIDGTDAINKNQLDTTLGEAGGILSEIKEEKSDFYDYLTKFADDTALVRGVAWVYNGGLAVGGETTVIINKPTKVFAVPYIEVNGSRQEVGYHYSFDATTQTITLVKPLEAGDFLVAMTTESSVPLEALLGSTVGASSIGMASGHTVQEAFDAMNSVSILEWHSAPYQNFGAALEAAANRAMANGRGTVVIPAGRYTSERTANITMTKGLRLVFAPDAWVTCYNPHDVVNIDINKQHLNITANGARIMAEWDLAVPSSAFAAVRLKDDTLDKSCSITDLKVGFKAGGGKFGWAMHCTAVNLSTFYRCLLQGEYGLHIEASKDRGDYAHAMGNQIVGCEIFTTYDAVTINNHGKFGCEGLLIHGCEFMSANTCIRIADVGLTDTNYLPPLFRIEGNHLNSYQALFCQNVVRLSFIHNDVQARHTTGMTPRGMLELGGVQGFQHHFNTYSSSRVGTGVNADKATPVFQFNSRLPNAYFISSNNNYWCDGMTNPVYGFETTAGSTIIRSTGEILQSAASWTTSDYFQYFRPDDKTIIGNAGATVGLGRIAQATLSGGTVTISRAPAVGNMYTFSTSVIPNSTNITQFTCPEILVGKQITIKLDAAEVTLTHSNNLVCPDWKSTKMWLPNVISVYFLNTTQAIVTGITDVNSTSHMDITTAPTSRNSPGYHGARFLDAANKFYYQFIGGYGWIRHKFEDF

Physico‐chemical properties

protein length:	833 AA
molecular weight:	91165,58320 Da
isoelectric point:	5,81766
aromaticity:	0,09724
hydropathy:	-0,12749

Domain architecture

XPO96701.1

1 833 aa

ATT 3–127 · STR 307–633 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604 IPR012334

IPR011050
STR

IPR011050

XPO96701.1

1833 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0225
ATT

DC_0225 DC_1079

XPO96701.1

1833 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	3	127	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
IPR012334	STR	IPR012334	307	633	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	309	515	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XPO96701.1

1 833 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	299	299	0,9926
Central domain	300	683	385	0,9674
C-terminal	684	833	149	0,9846

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Klebsiella phage KA1-1 [NCBI] · taxon 3385243

Viruses

Host

Klebsiella aerogenes [NCBI] · taxon 548

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

XPO96701.1 [NCBI]

Genbank nucleotide accession

PQ571294.1 [NCBI]

CDS location

range 6971 -> 9472
strand +

CDS

ATGGACCAAGACATTAAAACAGTCATTCAGTACCCAGTAGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTATCAGATGACAACCGCCGACTGCTGAGTAACATCACTGAGTACCGCTATGTGTCTAAGACCAGAGTGAAACTCCTTGTGGAAACAACGGGATTCGATCGGGTGGAAATCCGTAGGTTCACCTCAGCGTCTGAGCGCATCGTTGACTTCAGCGACGGCTCGGTTCTCCGCGCTAACGACCTCAATGTGTCCCAACTCCAATCAGCACACATAGCTGAAGAGGCCAGAGACGCAGCCCTGCTGGCTATGCCTCAGGATGACGCTGGGAACCTCGACGCCCGCAATCGGAGAATCGTCCGGTTAGCCCCGGGTATCGATGGGACCGACGCTATCAACAAGAACCAGCTGGATACGACTTTAGGTGAAGCTGGTGGAATCCTCTCAGAGATTAAAGAAGAGAAGTCAGACTTCTACGACTACCTCACCAAGTTCGCTGACGACACCGCTCTGGTTCGTGGGGTTGCTTGGGTGTACAACGGAGGGTTGGCTGTAGGTGGTGAGACCACGGTGATTATCAATAAGCCTACCAAGGTCTTCGCTGTGCCGTACATTGAAGTGAACGGCAGTCGCCAAGAGGTTGGCTATCATTACTCCTTCGACGCAACCACTCAGACTATCACTCTGGTTAAACCTCTGGAGGCCGGGGACTTCCTCGTAGCGATGACCACTGAATCAAGCGTACCTCTCGAAGCGCTCCTAGGGTCAACCGTGGGTGCATCCTCTATTGGGATGGCTAGTGGACACACCGTGCAGGAAGCTTTCGATGCGATGAACTCAGTGTCAATCCTTGAGTGGCACAGCGCTCCCTATCAGAACTTCGGTGCTGCCCTTGAGGCTGCGGCTAACCGAGCGATGGCTAACGGGCGTGGTACCGTGGTAATCCCAGCAGGACGCTACACGTCTGAACGTACAGCCAACATCACGATGACCAAAGGTCTCCGTCTGGTGTTCGCCCCGGATGCATGGGTAACCTGCTACAACCCGCATGACGTTGTCAACATCGACATCAACAAGCAGCACCTGAACATCACCGCTAACGGTGCACGCATCATGGCTGAATGGGACCTCGCGGTACCTTCCAGTGCGTTCGCTGCGGTGCGTCTTAAGGATGACACCTTGGACAAGTCCTGCTCCATTACGGACCTGAAGGTGGGCTTTAAGGCTGGTGGCGGCAAGTTCGGATGGGCGATGCACTGTACCGCAGTGAACCTCTCGACGTTCTATCGGTGCCTCTTGCAGGGTGAGTATGGTCTGCATATCGAAGCCTCTAAGGACCGTGGCGATTACGCCCACGCGATGGGTAACCAGATTGTCGGCTGTGAAATCTTCACGACCTACGATGCAGTGACCATTAACAACCACGGTAAGTTCGGCTGTGAGGGTCTCCTGATTCACGGCTGTGAGTTCATGAGCGCCAACACGTGTATTCGAATTGCTGACGTAGGCCTGACAGATACCAACTATCTGCCTCCGCTGTTCCGCATTGAGGGTAACCACCTAAACAGCTACCAAGCGTTGTTCTGCCAGAACGTAGTGCGCCTGTCGTTCATCCATAATGATGTCCAAGCGCGGCACACCACTGGTATGACTCCTCGCGGTATGCTTGAGCTGGGAGGTGTCCAAGGGTTCCAGCACCACTTCAATACGTACTCTTCGAGCCGCGTAGGGACTGGTGTCAACGCTGATAAGGCCACCCCGGTCTTCCAGTTCAACTCTCGGTTACCTAACGCATACTTCATTAGCTCCAATAACAACTATTGGTGTGACGGTATGACCAACCCGGTGTATGGCTTCGAGACCACAGCAGGCTCTACCATTATCCGCTCCACTGGTGAAATCCTCCAGTCTGCGGCATCGTGGACCACTTCGGACTACTTCCAGTATTTCAGACCTGATGACAAAACCATCATCGGGAACGCTGGGGCAACCGTTGGTCTAGGACGAATCGCACAGGCCACTCTGTCAGGCGGTACGGTGACAATCTCCCGCGCGCCCGCTGTTGGTAACATGTATACCTTCAGTACCTCAGTGATACCGAACTCGACGAACATCACGCAGTTCACCTGTCCTGAGATTCTCGTAGGGAAGCAAATCACCATCAAGCTGGATGCAGCTGAGGTGACCCTGACCCACTCGAACAACCTTGTGTGCCCGGACTGGAAGAGCACAAAGATGTGGTTACCTAACGTAATCTCAGTGTACTTCCTCAACACCACACAAGCAATCGTGACTGGAATCACTGACGTTAACTCAACGTCCCACATGGACATCACTACGGCACCGACTAGCCGCAACTCTCCGGGCTATCACGGCGCTCGATTCCTTGATGCGGCCAACAAGTTTTACTACCAGTTCATCGGTGGTTATGGTTGGATTCGCCATAAGTTCGAAGACTTCTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)