Protein

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Genbank accession
XYM57736.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,79
Protein sequence
MNRSNYSRIKSLYGGVVGSIQVMATPFTQSETDPNSQTWKDYVPGGFLPCDGTIRSARDYYALSQVLGVGSETKFKKPNSTIRDADLENNDLGQFQLPDLGSKVIIPSRSVGDYVNDLADDGETTRVGPAVEVFSNEGTQLTCDFIGNFEGVPKQVNYDMRSSPKYTFNTTSSTEFLDIENFQGHAHNISGFGIMNYSAQHQTGGDGKDRGRLSGNAGAGNFLDVSPVNTAFSSEHTHRIDKPVLYTHNFQYQHQDFDIPADGVFSTVNISTQEFKKLDRATTPFVIVMYIIKF
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32481,51330 Da
isoelectric point:5,22250
aromaticity:0,10884
hydropathy:-0,48776

Domains

Domains [InterPro]
IPR037053
13–100
IPR037053
XYM57736.1
1 294
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH3
[NCBI] 		3413214 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM57736.1 [NCBI]
Genbank nucleotide accession
PV340851 [NCBI]
CDS location
range 36190 -> 37074
strand +
CDS
ATGAACCGCAGCAACTATTCAAGAATCAAATCACTGTATGGTGGCGTGGTAGGATCTATTCAGGTCATGGCGACACCTTTTACTCAATCTGAAACTGATCCTAACTCCCAAACTTGGAAAGATTATGTTCCAGGTGGATTTTTACCATGTGATGGTACAATCAGAAGTGCTAGAGATTATTATGCATTGTCTCAAGTATTAGGTGTTGGTAGCGAAACTAAATTTAAGAAACCTAATAGTACCATTCGTGATGCTGATCTAGAAAATAATGATCTAGGTCAGTTTCAGTTACCTGATCTTGGATCTAAAGTTATTATTCCAAGTAGATCTGTTGGTGATTATGTCAATGATCTTGCTGATGATGGTGAGACTACTAGAGTTGGTCCTGCTGTCGAAGTATTTTCTAATGAAGGTACACAATTAACTTGTGATTTTATTGGTAACTTTGAAGGTGTACCAAAGCAGGTTAACTATGATATGAGATCTAGTCCTAAGTATACTTTTAATACTACATCTAGTACAGAATTTCTGGACATTGAAAACTTCCAGGGTCACGCTCATAATATCTCTGGTTTTGGTATTATGAACTATAGTGCTCAGCACCAGACAGGTGGTGACGGTAAAGACAGAGGAAGACTATCAGGTAACGCTGGTGCTGGTAACTTTCTAGATGTTAGTCCTGTTAATACAGCATTTTCATCTGAACACACTCATAGAATTGACAAACCTGTTCTATACACCCACAACTTCCAGTATCAGCACCAAGATTTTGATATTCCTGCTGATGGTGTATTTTCTACCGTTAACATTTCTACCCAAGAGTTTAAAAAATTAGACAGAGCTACAACTCCATTTGTCATTGTGATGTATATTATCAAGTTCTAA

Tertiary structure

PDB ID
cc8fcad5f05edb8143c3a5a7b948d096f137c9a76bd734b297ff5054124808dd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7276
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50