Protein

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Genbank accession
CAB4169900.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MALTKVSYSLINGAVLNVFDYGATGDGTTDDTTAIQAAITAAESNQQYRGIFFPVGTYKITDTLRIKKTQSWFGAGPVISGPDSDYTTDAGLPNVVTGGVVIWQSQIDKDGLLVRQDPVNTYRIVLGMENITWVGAITSAGVGPGGTTGNGIVIDPQSVAFNVECHFYNVNITYFRERGLKLLEGYYGSTFNVMSVNGNGKTGIAAVGTSQGEYSFSNIRCFGNGLLGSGETEEAGMVIDSGGAGITLQRISCTSNARVGLYIAGVQHQLIDYQSESFGNANNANQRNLIIYNCQPSVLRANFSPSAGFLGICVELRTATNGLLMGLNFYSSVDSTGYQVYEDASSGTNVIVGSSATRTVYKQIQPYTLFGFGADAYGYGTQTNNNAPAGNVGELITATVVAGSAVSLVTSTAKTVTSISLTPGDWDVSAVGDFTLAAATTSYFRTGVNVTTNTMPSQAGGSGIGTDPFVRLPLVLTTATSDYGQGLPPVRVSLAATTTIYLVCEATFSVGSVSAFGTIRARRMR
Physico‐chemical
properties
protein length:525 AA
molecular weight: 55019,86480 Da
isoelectric point:5,01248
aromaticity:0,09333
hydropathy:0,06876

Domains

Domains [InterPro]
IPR012334
5–304
IPR012334
IPR011050
12–299
IPR011050
IPR024535
16–219
IPR024535
CAB4169900.1
1 525
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4169900.1 [NCBI]
Genbank nucleotide accession
LR796851 [NCBI]
CDS location
range 17455 -> 19032
strand -
CDS
ATGGCACTCACAAAAGTTTCGTATAGTTTGATTAATGGCGCAGTCCTTAATGTATTTGATTACGGCGCAACTGGCGACGGAACTACCGATGACACAACGGCTATTCAAGCGGCTATTACGGCAGCGGAAAGTAACCAGCAATATCGCGGAATTTTTTTCCCCGTAGGCACCTACAAGATAACGGACACGCTTCGCATAAAGAAAACGCAGAGCTGGTTTGGTGCTGGCCCTGTTATTTCAGGCCCAGATTCTGATTACACGACTGATGCCGGTTTGCCTAATGTGGTCACAGGTGGTGTGGTTATCTGGCAATCGCAAATAGACAAAGATGGATTGCTTGTTCGGCAAGACCCCGTAAACACCTATCGTATTGTGTTGGGAATGGAAAACATTACGTGGGTTGGGGCGATCACAAGCGCAGGCGTTGGCCCAGGCGGTACAACTGGAAACGGTATTGTTATTGATCCGCAAAGCGTTGCGTTTAATGTTGAATGTCATTTTTACAATGTCAACATTACGTATTTTAGGGAGCGTGGTTTAAAACTGCTAGAAGGGTATTACGGGTCAACTTTCAATGTTATGTCTGTCAACGGCAACGGCAAGACAGGCATTGCCGCTGTAGGCACAAGTCAAGGCGAGTATTCATTTTCAAATATTCGCTGTTTTGGAAATGGTTTATTAGGCAGCGGTGAGACCGAAGAAGCTGGAATGGTGATTGATTCTGGTGGTGCTGGAATAACTTTACAAAGAATTTCTTGCACATCAAATGCTCGTGTCGGGCTGTACATAGCAGGCGTTCAGCATCAGTTAATAGATTATCAATCTGAATCTTTTGGCAATGCAAACAACGCAAATCAACGAAATTTAATTATTTACAATTGCCAGCCTAGTGTTTTAAGGGCTAACTTTTCGCCTAGTGCTGGATTTTTAGGCATTTGCGTAGAACTGCGGACTGCAACAAATGGCTTGTTGATGGGGTTAAATTTTTATTCTTCTGTTGATTCGACGGGCTATCAAGTCTACGAAGATGCGTCCAGCGGCACAAACGTCATTGTTGGTTCAAGTGCAACCAGAACTGTATACAAACAAATTCAGCCCTATACGTTGTTTGGCTTTGGCGCAGATGCGTATGGCTACGGCACACAAACAAATAACAACGCCCCCGCAGGCAACGTGGGCGAACTCATCACTGCAACGGTTGTTGCTGGTTCTGCGGTTTCTTTGGTGACTTCCACGGCTAAAACGGTCACATCAATTAGCTTGACCCCAGGCGATTGGGATGTGTCTGCTGTTGGAGACTTTACGCTGGCTGCTGCGACCACCAGTTATTTTAGAACTGGTGTCAATGTCACTACTAACACAATGCCCAGTCAAGCAGGCGGCTCGGGTATTGGAACTGATCCCTTTGTAAGACTGCCTCTGGTTTTGACTACTGCCACCAGCGATTACGGGCAAGGATTGCCGCCGGTAAGGGTTAGTTTAGCGGCAACGACGACCATTTATCTGGTGTGCGAGGCAACATTCTCTGTTGGTTCGGTTTCAGCATTTGGCACTATTCGCGCAAGACGGATGCGTTAG

Tertiary structure

PDB ID
ebcdbe8ac9abb5dc25520789f3e4056508c4ff7dd4ffea0ad7c126457e304b63
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7808
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50