Protein

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Genbank accession
YP_010069811.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MAVTGPWVGSSAVVNTGQNWMSGAAQRLRMGAPFWMSNMIGRSVEVIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGDLVSYSKDVPLFFMYGDTPNEYVQLNIHGVTMYGRGGNGGSNSPGSAGGHCIQNDIGGRLRINNGGAIAGGGGGGGGGYYSPFSQMRLTFGGGGGRPFGAPGGSIDMQSGATAGTISAPGSGSVNGIYSGGSGGEVGSAGGRCNIRGQGSEYDGGAAGYAVIGSTPTWQNVGAIYGPRV
Physico‐chemical
properties
protein length:258 AA
molecular weight: 26052,49840 Da
isoelectric point:7,74996
aromaticity:0,09690
hydropathy:-0,17636

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_2135
STR
1–139
DC_2135
YP_010069811.1
1 258
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-139 | RBD 140-258
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010069811.1
1 258
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,8848
Central domain 12 215 205 0,7957
C-terminal 216 258 42 0,6740
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-215
C-terminal
216-258

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM-G28
[NCBI] 		2081604 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010069811.1 [NCBI]
Genbank nucleotide accession
NC_054916 [NCBI]
CDS location
range 160167 -> 160943
strand +
CDS
ATGGCAGTAACAGGACCGTGGGTAGGATCGTCTGCAGTAGTTAATACAGGACAAAATTGGATGAGTGGCGCGGCCCAACGATTAAGAATGGGTGCTCCATTTTGGATGAGTAATATGATAGGTCGATCTGTTGAAGTAATTCATACGCTTGGAGCAGACCATAACTTCAATGGCCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATTACTGGAGATTTAGTATCATATTCTAAAGATGTTCCTTTATTCTTTATGTATGGAGATACACCGAATGAATATGTTCAATTGAATATACATGGTGTAACGATGTATGGCCGTGGCGGTAATGGCGGTAGCAATAGTCCTGGCTCAGCTGGGGGTCATTGTATTCAAAATGATATTGGTGGGAGACTAAGAATTAATAATGGCGGAGCTATTGCTGGCGGCGGTGGCGGCGGCGGCGGCGGATATTATTCTCCTTTTTCACAAATGAGATTGACCTTTGGCGGTGGTGGCGGTCGTCCGTTTGGCGCGCCGGGCGGATCTATTGATATGCAATCAGGAGCAACTGCTGGTACTATTTCTGCACCAGGCTCAGGGTCTGTGAACGGTATCTATAGCGGCGGGTCTGGTGGTGAAGTTGGCTCCGCAGGAGGTAGATGTAATATTCGTGGTCAAGGATCTGAATACGATGGCGGAGCTGCTGGTTATGCCGTCATAGGGTCTACGCCGACGTGGCAAAACGTTGGAGCAATATATGGTCCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b535234f508a02c7972aef06d64cf83fa8e025cc6a60815c1340ca2e0f016707
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8749
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
In vitro evaluation of an E. coli phage cocktail to fight colibacillose in chicken Schmidt,I., Wittmann,J., Bunk,B., Sproer,C., Rohde,M., Rohde,C., Kittler,S., Mengden,R., Bierbrodt,A. and Lehnherr,H. 2025-05 — GenBank