Protein

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Genbank accession
UOK17282.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIRLNDSLSTSTQERVSVLDANTLEVLFQAASPMRVSVKESKRATKFAVEDGTERSDHVVRELIEVQIDFVLTADVRNAFQSLRQAHEQNKLVSVQTKVRLYENLLITDIPHDETPELGMAIAVPVRLQEFLQVKPEYGTLPPEKVAKKNQSSTVQRGQQTGSEREESSILGRGARGARKWFS
Physico‐chemical
properties
protein length:183 AA
molecular weight: 20575,04570 Da
isoelectric point:6,85952
aromaticity:0,04918
hydropathy:-0,47760

Domains

Domains [InterPro]
DC_0601
STR
3–181
DC_0601
IPR048494
ATT
36–142
IPR048494
UOK17282.1
1 183
Architecture
STR
ATT
STR
STR 3-35 | ATT 36-142 | STR 143-181 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage vB_BaM-IFTN5
[NCBI] 		2928721 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bordetella avium
[NCBI] 		521 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOK17282.1 [NCBI]
Genbank nucleotide accession
OM293954.1 [NCBI]
CDS location
range 13900 -> 14451
strand +
CDS
ATGATCCGACTAAATGACTCCTTATCGACCTCAACGCAAGAGCGGGTTTCTGTGTTGGATGCCAATACGTTAGAGGTGCTGTTTCAGGCCGCCTCTCCTATGCGGGTGTCCGTCAAGGAGAGCAAGCGCGCCACAAAGTTTGCCGTTGAGGATGGCACGGAACGATCAGATCATGTTGTTCGTGAGCTGATCGAGGTACAGATCGACTTTGTTCTGACGGCTGATGTCCGCAATGCTTTTCAGTCGCTGCGACAGGCGCACGAGCAAAACAAGCTGGTGTCGGTTCAGACCAAAGTCCGGCTATACGAAAACCTGCTGATTACCGACATACCGCACGACGAGACGCCGGAGCTTGGGATGGCTATCGCTGTGCCGGTCAGACTTCAGGAGTTTTTGCAGGTGAAGCCAGAGTACGGGACTTTGCCGCCTGAAAAGGTGGCGAAGAAGAACCAGTCGAGCACGGTGCAGCGCGGGCAGCAGACGGGCAGCGAGAGGGAAGAAAGCAGTATTTTGGGACGTGGCGCGAGGGGGGCGCGGAAATGGTTCAGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ed5a99674fbf0af7fa8b16097555a5d1f0c6feba0c52a9238af431d77304a3d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7964
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Bordetella avium bacteriophages Serian,D., Churin,Y., Kehrenberg,C. and Hammerl,J.A. 2023-06-15 — GenBank