Phage RBP Database

Genbank accession

UOK17282.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Protein sequence

MIRLNDSLSTSTQERVSVLDANTLEVLFQAASPMRVSVKESKRATKFAVEDGTERSDHVVRELIEVQIDFVLTADVRNAFQSLRQAHEQNKLVSVQTKVRLYENLLITDIPHDETPELGMAIAVPVRLQEFLQVKPEYGTLPPEKVAKKNQSSTVQRGQQTGSEREESSILGRGARGARKWFS

Physico‐chemical properties

protein length:	183 AA
molecular weight:	20575,04570 Da
isoelectric point:	6,85952
aromaticity:	0,04918
hydropathy:	-0,47760

Domain architecture

UOK17282.1

1 183 aa

ATT 36–142 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR048494
ATT

IPR048494

UOK17282.1

1183 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0601
STR

DC_0601

UOK17282.1

1183 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR048494	ATT	DC_0432	36	142	InterPro cluster	Dit-like phage tail protein, N-terminal domain	Central	Medium	Text match	416 proteins / 416 hits

Proteins with similar domain architecture

Phage

Bordetella phage vB_BaM-IFTN5 [NCBI] · taxon 2928721

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Bordetella avium [NCBI] · taxon 521

cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Genbank protein accession

UOK17282.1 [NCBI]

Genbank nucleotide accession

OM293954.1 [NCBI]

CDS location

range 13900 -> 14451
strand +

CDS

ATGATCCGACTAAATGACTCCTTATCGACCTCAACGCAAGAGCGGGTTTCTGTGTTGGATGCCAATACGTTAGAGGTGCTGTTTCAGGCCGCCTCTCCTATGCGGGTGTCCGTCAAGGAGAGCAAGCGCGCCACAAAGTTTGCCGTTGAGGATGGCACGGAACGATCAGATCATGTTGTTCGTGAGCTGATCGAGGTACAGATCGACTTTGTTCTGACGGCTGATGTCCGCAATGCTTTTCAGTCGCTGCGACAGGCGCACGAGCAAAACAAGCTGGTGTCGGTTCAGACCAAAGTCCGGCTATACGAAAACCTGCTGATTACCGACATACCGCACGACGAGACGCCGGAGCTTGGGATGGCTATCGCTGTGCCGGTCAGACTTCAGGAGTTTTTGCAGGTGAAGCCAGAGTACGGGACTTTGCCGCCTGAAAAGGTGGCGAAGAAGAACCAGTCGAGCACGGTGCAGCGCGGGCAGCAGACGGGCAGCGAGAGGGAAGAAAGCAGTATTTTGGGACGTGGCGCGAGGGGGGCGCGGAAATGGTTCAGCTAG

Title	Authors	Date	PMID	Source
Isolation and characterization of Bordetella avium bacteriophages	Serian,D., Churin,Y., Kehrenberg,C. and Hammerl,J.A.	2023-06-15	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature