Protein

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Genbank accession
YP_010246548.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MLVPSGSVNFPSGAFPVGAGGAARAPFEGRTESAVKGLLKTDHKPEIDEAFSGFNSGLVGVLQRVLMGTGTGPLTAGLAWLRDLMKNRWDQVDETQESVVSVGTQVHYVQEVIALQSGMGVWETGPDRTGTPSFPFGLLNLTVPSISVSVSGGSHSHNVTGSTGNATAGGDSHNHSAGSLSASSTNSTHSHTATVDVNSSVPTVNVTSSYAPWANVIFKSAAERKVITFLAYRTGTVSSFNIDVYKLEADGSSSIVYSSPDLSGNLTGAIGWQQHLMSGSILADLGDAYDVQFRMTGSGSVSLAGINFPNPTPLPGFRPYASGSARNASTTPAPATIPTATRDTMYVGPTPFVSIGIDVGQTTIPRFVFDDFNRAALGNVWIPYGSIGISSNRVTHTGSALVNNSSAAMRSQPMATDAIEVAADLFVDTHAAGIGLCCGQGMTGGAWLVVEDNDSEYRGIRIMTGNYDNRVARASLPGTPVSGRYTLRYTPSDNTYRAYAGASTTEPILSWVDSGNVVQHGIGRRWVGMVTRRAFTFASGRIDNFTAADV
Physico‐chemical
properties
protein length:550 AA
molecular weight: 57599,41090 Da
isoelectric point:5,93902
aromaticity:0,08182
hydropathy:-0,07982

Domains

Domains [InterPro]
DC_0513
STR
1–550
DC_0513
YP_010246548.1
1 550
Architecture
STR
STR 1-550
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010246548.1
1 550
Domain Start End Length (AA) Confidence
N-terminal 1 108 108 0,9842
Central domain 109 307 200 0,3099
C-terminal 308 550 242 0,9486
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-108
Central
109-307
C-terminal
308-550

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Kudefre
[NCBI] 		2885975 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010246548.1 [NCBI]
Genbank nucleotide accession
NC_060136 [NCBI]
CDS location
range 24004 -> 25656
strand +
CDS
ATGCTAGTTCCTAGTGGTTCTGTGAATTTCCCGTCTGGCGCTTTCCCTGTTGGTGCTGGCGGTGCGGCTCGTGCCCCGTTTGAGGGGCGTACTGAGTCTGCGGTTAAGGGGCTGCTTAAGACGGATCACAAGCCTGAGATTGATGAGGCGTTCTCGGGTTTCAATTCGGGCCTTGTGGGTGTGTTGCAGCGCGTCCTTATGGGGACGGGGACGGGGCCGCTGACGGCCGGCTTGGCGTGGTTGCGGGATCTGATGAAGAACCGCTGGGACCAGGTTGATGAGACTCAAGAGTCTGTGGTGTCGGTGGGCACTCAGGTGCACTACGTGCAGGAAGTTATCGCCTTGCAGTCCGGTATGGGCGTGTGGGAGACGGGGCCGGATCGCACTGGCACACCGAGCTTCCCGTTCGGTCTGCTAAATCTCACGGTGCCGTCTATCTCGGTGTCGGTGAGCGGTGGCTCACACAGCCACAATGTCACTGGCAGCACGGGCAATGCGACCGCTGGCGGGGATAGCCACAATCACAGCGCGGGGTCGCTGAGCGCGAGTAGCACTAACTCGACGCACTCGCATACCGCGACGGTGGACGTCAACTCGTCTGTCCCCACGGTGAATGTGACCAGCTCGTATGCTCCCTGGGCTAACGTCATCTTCAAGTCGGCCGCTGAGCGCAAGGTCATCACCTTCCTCGCTTACCGCACCGGCACTGTGTCTAGCTTCAATATCGACGTCTACAAGCTTGAGGCTGACGGTTCGTCGAGCATTGTCTATTCGTCTCCGGATCTGTCGGGCAACCTGACGGGCGCTATCGGCTGGCAGCAGCACCTTATGTCGGGGTCGATTCTCGCTGACCTTGGTGACGCTTACGATGTGCAGTTCCGCATGACGGGTTCGGGCTCTGTTTCGCTGGCCGGGATTAACTTCCCTAATCCCACTCCCCTGCCTGGCTTCCGGCCTTATGCGTCGGGATCTGCGCGCAATGCTTCCACCACTCCTGCACCCGCCACAATTCCTACGGCTACGCGGGACACCATGTATGTCGGTCCTACGCCGTTCGTGTCTATCGGCATTGATGTGGGGCAGACGACGATTCCGCGGTTCGTTTTCGACGACTTCAACCGTGCAGCGCTTGGCAATGTGTGGATTCCTTACGGGTCTATCGGGATCAGTAGCAATCGTGTCACTCACACGGGTAGCGCTCTCGTTAACAACTCGTCTGCTGCTATGCGGTCTCAACCGATGGCTACAGATGCAATCGAGGTGGCTGCGGATCTGTTCGTTGATACGCATGCTGCGGGTATCGGATTGTGCTGCGGGCAGGGAATGACCGGTGGCGCTTGGCTTGTGGTCGAGGACAACGACAGCGAGTACCGGGGCATCCGGATCATGACCGGCAATTACGACAACCGTGTGGCTCGCGCTTCGCTTCCTGGGACTCCGGTTTCGGGCCGATACACGTTGCGCTACACGCCTTCCGATAACACCTATCGGGCTTATGCGGGGGCGTCGACTACCGAGCCGATCCTGTCGTGGGTGGATAGCGGGAACGTTGTTCAGCACGGCATTGGTCGTCGCTGGGTCGGAATGGTCACTCGTCGCGCGTTCACGTTCGCTTCGGGCCGTATTGACAACTTCACTGCCGCTGACGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
240f64d1269134d207bbed44c010f440fb5bac8b6b31a21f8c6e93231c8831b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6896
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50