Protein

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Genbank accession
YP_010246548.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,55
Seq2Symm
C1 confidence 0,962
C1 0,962
C3 0,042
I 0,008
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MLVPSGSVNFPSGAFPVGAGGAARAPFEGRTESAVKGLLKTDHKPEIDEAFSGFNSGLVGVLQRVLMGTGTGPLTAGLAWLRDLMKNRWDQVDETQESVVSVGTQVHYVQEVIALQSGMGVWETGPDRTGTPSFPFGLLNLTVPSISVSVSGGSHSHNVTGSTGNATAGGDSHNHSAGSLSASSTNSTHSHTATVDVNSSVPTVNVTSSYAPWANVIFKSAAERKVITFLAYRTGTVSSFNIDVYKLEADGSSSIVYSSPDLSGNLTGAIGWQQHLMSGSILADLGDAYDVQFRMTGSGSVSLAGINFPNPTPLPGFRPYASGSARNASTTPAPATIPTATRDTMYVGPTPFVSIGIDVGQTTIPRFVFDDFNRAALGNVWIPYGSIGISSNRVTHTGSALVNNSSAAMRSQPMATDAIEVAADLFVDTHAAGIGLCCGQGMTGGAWLVVEDNDSEYRGIRIMTGNYDNRVARASLPGTPVSGRYTLRYTPSDNTYRAYAGASTTEPILSWVDSGNVVQHGIGRRWVGMVTRRAFTFASGRIDNFTAADV
Physico‐chemical
properties
protein length:550 AA
molecular weight: 57599,41090 Da
isoelectric point:5,93902
aromaticity:0,08182
hydropathy:-0,07982

Domains

View on InterPro

No domain architecture available.

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_010246548.1
1 550 aa
Domain Start End Length (AA) Confidence
N-terminal 1 108 108 0,9842
Central domain 109 307 200 0,3099
C-terminal 308 550 242 0,9486
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Gordonia phage Kudefre [NCBI] · taxon 2885975
Uroviricota Caudoviricetes Octobienvirus Octobienvirus kudefre
Host
Gordonia terrae [NCBI] · taxon 2055
Actinomycetota Actinomycetes Mycobacteriales Gordoniaceae Gordonia Gordonia terrae

Coding sequence (CDS)

Genbank protein accession
YP_010246548.1 [NCBI]
Genbank nucleotide accession
NC_060136 [NCBI]
CDS location
range 24004 -> 25656
strand +
CDS
ATGCTAGTTCCTAGTGGTTCTGTGAATTTCCCGTCTGGCGCTTTCCCTGTTGGTGCTGGCGGTGCGGCTCGTGCCCCGTTTGAGGGGCGTACTGAGTCTGCGGTTAAGGGGCTGCTTAAGACGGATCACAAGCCTGAGATTGATGAGGCGTTCTCGGGTTTCAATTCGGGCCTTGTGGGTGTGTTGCAGCGCGTCCTTATGGGGACGGGGACGGGGCCGCTGACGGCCGGCTTGGCGTGGTTGCGGGATCTGATGAAGAACCGCTGGGACCAGGTTGATGAGACTCAAGAGTCTGTGGTGTCGGTGGGCACTCAGGTGCACTACGTGCAGGAAGTTATCGCCTTGCAGTCCGGTATGGGCGTGTGGGAGACGGGGCCGGATCGCACTGGCACACCGAGCTTCCCGTTCGGTCTGCTAAATCTCACGGTGCCGTCTATCTCGGTGTCGGTGAGCGGTGGCTCACACAGCCACAATGTCACTGGCAGCACGGGCAATGCGACCGCTGGCGGGGATAGCCACAATCACAGCGCGGGGTCGCTGAGCGCGAGTAGCACTAACTCGACGCACTCGCATACCGCGACGGTGGACGTCAACTCGTCTGTCCCCACGGTGAATGTGACCAGCTCGTATGCTCCCTGGGCTAACGTCATCTTCAAGTCGGCCGCTGAGCGCAAGGTCATCACCTTCCTCGCTTACCGCACCGGCACTGTGTCTAGCTTCAATATCGACGTCTACAAGCTTGAGGCTGACGGTTCGTCGAGCATTGTCTATTCGTCTCCGGATCTGTCGGGCAACCTGACGGGCGCTATCGGCTGGCAGCAGCACCTTATGTCGGGGTCGATTCTCGCTGACCTTGGTGACGCTTACGATGTGCAGTTCCGCATGACGGGTTCGGGCTCTGTTTCGCTGGCCGGGATTAACTTCCCTAATCCCACTCCCCTGCCTGGCTTCCGGCCTTATGCGTCGGGATCTGCGCGCAATGCTTCCACCACTCCTGCACCCGCCACAATTCCTACGGCTACGCGGGACACCATGTATGTCGGTCCTACGCCGTTCGTGTCTATCGGCATTGATGTGGGGCAGACGACGATTCCGCGGTTCGTTTTCGACGACTTCAACCGTGCAGCGCTTGGCAATGTGTGGATTCCTTACGGGTCTATCGGGATCAGTAGCAATCGTGTCACTCACACGGGTAGCGCTCTCGTTAACAACTCGTCTGCTGCTATGCGGTCTCAACCGATGGCTACAGATGCAATCGAGGTGGCTGCGGATCTGTTCGTTGATACGCATGCTGCGGGTATCGGATTGTGCTGCGGGCAGGGAATGACCGGTGGCGCTTGGCTTGTGGTCGAGGACAACGACAGCGAGTACCGGGGCATCCGGATCATGACCGGCAATTACGACAACCGTGTGGCTCGCGCTTCGCTTCCTGGGACTCCGGTTTCGGGCCGATACACGTTGCGCTACACGCCTTCCGATAACACCTATCGGGCTTATGCGGGGGCGTCGACTACCGAGCCGATCCTGTCGTGGGTGGATAGCGGGAACGTTGTTCAGCACGGCATTGGTCGTCGCTGGGTCGGAATGGTCACTCGTCGCGCGTTCACGTTCGCTTCGGGCCGTATTGACAACTTCACTGCCGCTGACGTGTGA

Genome Context

Tertiary structure

YP_010246548.1
ESMFold structure
Source ESMFold
pLDDT 69.0
Oligomeric state monomer
Download structure