Protein

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Genbank accession
UQT02954.1 [GenBank]
Protein name
pectin lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,99
Protein sequence
MPKIYYIDPSSRTNGDGTINKPFNSLNEIVKQPYPYTALIKRGTVERVSITLPSMTGQVERTTIGSYGSGIRPVLLPKSAGSPIITSTLVKHLLITDIDLTIDLFSYTSENAIFLRADSEGVGNNVADVGITNVDVIYQTTVVTKTKAFFIDAIGGANLTYSNDDLYIKNCNVYGGHWAAQINGGGAYYSINGGDTYRAKRMLIDNCSHIDGVGDSWMAMRANGEGKACITNCYSKSSAYRTDTSIYTAAIWMYGCENTGIEYCEVAGTLPNRYDKMGFDIDGNNKDVWVRYCYSHNNAGGFIMFADAESKGKNFASLAEAEQFLITEQHGIQNCVFEYCLSYNDGVARGGYGGRWPKITLVSNPVNCAVRNCTIIDTISKTDLHLVELLEYYYEPIWKKYPMVMENNVFYFKYPRYREGSGPPGEIGYGNFKNIIWRNNIFWTETGDPRDWNPRSGTVVNSIFTDPKLSYLTDVPPSGLEAAKLIKLLTGSAALNSGTTNSLPDILGNRGNNIGWLQ
Physico‐chemical
properties
protein length:518 AA
molecular weight: 57293,94360 Da
isoelectric point:5,79942
aromaticity:0,11390
hydropathy:-0,26409

Domains

View on InterPro
Domain architecture
UQT02954.1
1 518 aa
STR 2–498 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
UQT02954.1
1 518 aa
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,7152
Central domain 16 483 469 0,9933
C-terminal 484 518 34 0,7062
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Serratia phage vB_SmaS-Totoro [NCBI] · taxon 2943840
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Serratia marcescens [NCBI] · taxon 615
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
UQT02954.1 [NCBI]
Genbank nucleotide accession
ON287372 [NCBI]
CDS location
range 69959 -> 71515
strand +
CDS
ATGCCTAAAATTTATTACATCGACCCCTCTTCCCGCACTAACGGAGATGGTACAATTAACAAACCGTTCAACTCACTGAATGAAATTGTTAAGCAACCCTACCCGTATACTGCGTTGATTAAACGGGGAACAGTAGAGAGAGTCTCTATCACTCTACCTAGTATGACCGGACAAGTAGAGCGGACAACAATCGGCTCTTATGGTTCTGGTATTCGTCCGGTTCTTTTACCTAAGAGCGCAGGTAGTCCAATAATTACCTCAACACTAGTTAAACACCTGCTGATTACTGATATCGATTTGACGATCGATCTTTTCTCCTACACCTCAGAGAATGCGATCTTCCTTCGGGCAGACAGTGAAGGTGTTGGTAACAATGTTGCTGACGTAGGTATCACCAACGTCGACGTTATTTATCAGACTACCGTCGTGACTAAGACAAAGGCATTCTTTATCGATGCCATTGGCGGTGCTAATTTGACGTACAGTAATGATGACTTGTACATCAAGAATTGTAACGTCTACGGCGGACATTGGGCGGCGCAGATCAACGGAGGTGGTGCTTATTACAGCATTAACGGAGGCGATACCTATCGCGCTAAACGGATGTTAATCGATAACTGTTCCCACATCGATGGTGTTGGTGACTCATGGATGGCAATGCGTGCTAATGGTGAAGGTAAAGCTTGTATCACGAACTGTTATTCTAAGTCATCTGCTTACCGGACTGATACAAGCATCTATACCGCGGCCATCTGGATGTATGGGTGCGAGAATACTGGTATAGAGTACTGCGAAGTTGCAGGGACACTACCTAACCGTTACGACAAGATGGGATTCGATATCGACGGTAACAATAAAGATGTCTGGGTTCGTTACTGTTACAGCCACAACAACGCCGGCGGCTTCATCATGTTCGCCGACGCAGAAAGTAAAGGGAAGAACTTCGCTTCATTAGCTGAGGCAGAACAATTCCTTATTACGGAGCAGCACGGTATTCAGAATTGCGTATTCGAATACTGTCTGTCCTACAATGATGGCGTTGCTCGTGGTGGATATGGCGGACGCTGGCCTAAGATAACGCTCGTAAGTAACCCGGTTAATTGCGCAGTTCGTAACTGTACGATCATCGATACGATCAGTAAGACCGATCTACACCTAGTCGAGCTGCTGGAGTACTACTACGAACCTATCTGGAAGAAATACCCGATGGTGATGGAGAACAACGTGTTCTACTTCAAGTATCCTCGATACCGTGAAGGTAGCGGTCCTCCTGGGGAAATTGGTTATGGCAACTTCAAGAACATCATCTGGCGTAACAACATCTTCTGGACAGAGACAGGGGATCCACGCGATTGGAACCCTCGGTCAGGTACGGTAGTTAACTCTATCTTTACCGATCCTAAATTGTCTTACTTAACGGATGTTCCTCCGAGTGGCCTGGAAGCTGCTAAGTTGATTAAGTTGTTGACAGGCTCTGCTGCACTCAATAGCGGTACTACCAACTCATTACCGGACATCCTTGGTAATCGTGGTAACAACATCGGCTGGTTGCAGTAA

Genome Context

Tertiary structure

UQT02954.1
ESMFold structure
Source ESMFold
pLDDT 82.2
Oligomeric state monomer
Download structure