Protein

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Genbank accession
UQT02954.1 [GenBank]
Protein name
pectin lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPKIYYIDPSSRTNGDGTINKPFNSLNEIVKQPYPYTALIKRGTVERVSITLPSMTGQVERTTIGSYGSGIRPVLLPKSAGSPIITSTLVKHLLITDIDLTIDLFSYTSENAIFLRADSEGVGNNVADVGITNVDVIYQTTVVTKTKAFFIDAIGGANLTYSNDDLYIKNCNVYGGHWAAQINGGGAYYSINGGDTYRAKRMLIDNCSHIDGVGDSWMAMRANGEGKACITNCYSKSSAYRTDTSIYTAAIWMYGCENTGIEYCEVAGTLPNRYDKMGFDIDGNNKDVWVRYCYSHNNAGGFIMFADAESKGKNFASLAEAEQFLITEQHGIQNCVFEYCLSYNDGVARGGYGGRWPKITLVSNPVNCAVRNCTIIDTISKTDLHLVELLEYYYEPIWKKYPMVMENNVFYFKYPRYREGSGPPGEIGYGNFKNIIWRNNIFWTETGDPRDWNPRSGTVVNSIFTDPKLSYLTDVPPSGLEAAKLIKLLTGSAALNSGTTNSLPDILGNRGNNIGWLQ
Physico‐chemical
properties
protein length:518 AA
molecular weight: 57293,94360 Da
isoelectric point:5,79942
aromaticity:0,11390
hydropathy:-0,26409

Domains

Domains [InterPro]
IPR011050
2–498
IPR011050
IPR012334
5–317
IPR012334
UQT02954.1
1 518
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS-Totoro
[NCBI] 		2943840 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UQT02954.1 [NCBI]
Genbank nucleotide accession
ON287372 [NCBI]
CDS location
range 69959 -> 71515
strand +
CDS
ATGCCTAAAATTTATTACATCGACCCCTCTTCCCGCACTAACGGAGATGGTACAATTAACAAACCGTTCAACTCACTGAATGAAATTGTTAAGCAACCCTACCCGTATACTGCGTTGATTAAACGGGGAACAGTAGAGAGAGTCTCTATCACTCTACCTAGTATGACCGGACAAGTAGAGCGGACAACAATCGGCTCTTATGGTTCTGGTATTCGTCCGGTTCTTTTACCTAAGAGCGCAGGTAGTCCAATAATTACCTCAACACTAGTTAAACACCTGCTGATTACTGATATCGATTTGACGATCGATCTTTTCTCCTACACCTCAGAGAATGCGATCTTCCTTCGGGCAGACAGTGAAGGTGTTGGTAACAATGTTGCTGACGTAGGTATCACCAACGTCGACGTTATTTATCAGACTACCGTCGTGACTAAGACAAAGGCATTCTTTATCGATGCCATTGGCGGTGCTAATTTGACGTACAGTAATGATGACTTGTACATCAAGAATTGTAACGTCTACGGCGGACATTGGGCGGCGCAGATCAACGGAGGTGGTGCTTATTACAGCATTAACGGAGGCGATACCTATCGCGCTAAACGGATGTTAATCGATAACTGTTCCCACATCGATGGTGTTGGTGACTCATGGATGGCAATGCGTGCTAATGGTGAAGGTAAAGCTTGTATCACGAACTGTTATTCTAAGTCATCTGCTTACCGGACTGATACAAGCATCTATACCGCGGCCATCTGGATGTATGGGTGCGAGAATACTGGTATAGAGTACTGCGAAGTTGCAGGGACACTACCTAACCGTTACGACAAGATGGGATTCGATATCGACGGTAACAATAAAGATGTCTGGGTTCGTTACTGTTACAGCCACAACAACGCCGGCGGCTTCATCATGTTCGCCGACGCAGAAAGTAAAGGGAAGAACTTCGCTTCATTAGCTGAGGCAGAACAATTCCTTATTACGGAGCAGCACGGTATTCAGAATTGCGTATTCGAATACTGTCTGTCCTACAATGATGGCGTTGCTCGTGGTGGATATGGCGGACGCTGGCCTAAGATAACGCTCGTAAGTAACCCGGTTAATTGCGCAGTTCGTAACTGTACGATCATCGATACGATCAGTAAGACCGATCTACACCTAGTCGAGCTGCTGGAGTACTACTACGAACCTATCTGGAAGAAATACCCGATGGTGATGGAGAACAACGTGTTCTACTTCAAGTATCCTCGATACCGTGAAGGTAGCGGTCCTCCTGGGGAAATTGGTTATGGCAACTTCAAGAACATCATCTGGCGTAACAACATCTTCTGGACAGAGACAGGGGATCCACGCGATTGGAACCCTCGGTCAGGTACGGTAGTTAACTCTATCTTTACCGATCCTAAATTGTCTTACTTAACGGATGTTCCTCCGAGTGGCCTGGAAGCTGCTAAGTTGATTAAGTTGTTGACAGGCTCTGCTGCACTCAATAGCGGTACTACCAACTCATTACCGGACATCCTTGGTAATCGTGGTAACAACATCGGCTGGTTGCAGTAA

Tertiary structure

PDB ID
46d132d75462dfdd6bde4534379adb13f0d565aef86466c7e0747536e1c49213
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50