Protein

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Genbank accession
XPO97406.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,99
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVAGGADIDYATNAVTGQTQKTMPAILRDIGFEPASFDFTTGGTLSTADRNKAVLWPMADGGDGDWYYWEGALPKVIPAASTPSSTGGIADGAWRPVGDIELRSQISDPDGAEKYPELQIARWRDEGDARGWGIAPGNPDNSSLINGAISELSSRGGGELLFRVPGVLLIKGPIVPRRGVICKASPGTVTIKLADNSNTGMVESYKFDTLRANSAHSIADDPDFTQDYGFDGFIFDGNGANQSKATLNYGVKMYGLRLTLKRCIIYNFAGIGLLTSHAGAGSGAYTIDKASIPACIDELEIINSFDENWIYEGPSDTPIGSVVTNENGDKNNPGTTPQTSRHFPGEPVHSVVVAANKAMQADYLNLNSPRFGKCFVAKDNTRLTIDTLITAGGWGNVEFGVNCNGVVKNNFSQANKINWGGVTKPFVLNYSNKLVITDTIIRRASGQDVGADGVFDTGGANWGTVANLQAATQGGHLFVADAVSIMIGQLKSVGIGGLGSDGLVSAALVTTENCDQLNCTMTFSNVSLAWRNKKNGLIGNFIATGDVGTGNNFAEGLTGTPALNKSSLMTMQAVFKDGTGTVKTNNFIGYGNIDLTSTGGKTVTIPHTLWRAPSVEEIQATLRHSSFTAPGTFSPVYISSFNATQVVLRVDVTTAATGTPVSQVVCRIN
Physico‐chemical
properties
protein length:702 AA
molecular weight: 73864,88740 Da
isoelectric point:5,27622
aromaticity:0,07835
hydropathy:-0,12536

Domains

View on InterPro
Domain architecture
XPO97406.1
1 702 aa
ATT 66–141 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
XPO97406.1
1 702 aa
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,9913
Central domain 175 596 423 0,9921
C-terminal 597 702 105 0,9729
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Shigella phage phiSD1 [NCBI] · taxon 3385254
Viruses
Host
Shigella dysenteriae [NCBI] · taxon 622
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
XPO97406.1 [NCBI]
Genbank nucleotide accession
PQ571306 [NCBI]
CDS location
range 7272 -> 9380
strand +
CDS
ATGTCAAGCGGATGCGGTGACGTTTTAAGCCTGGCGGATTTACAAACCGCCAAGAAACACCAGATTTTCGAAGCCGAGGTCATCACCGGTAAATCCGGTGGTGTCGCTGGTGGTGCTGATATTGATTACGCGACCAACGCTGTTACAGGCCAAACACAAAAGACGATGCCCGCGATTCTTCGAGATATTGGCTTCGAACCCGCATCTTTTGATTTTACTACAGGCGGGACCTTGTCTACGGCGGACAGAAACAAAGCCGTCCTGTGGCCTATGGCCGATGGTGGGGATGGCGATTGGTATTACTGGGAAGGTGCGCTGCCGAAGGTAATCCCTGCAGCTTCAACTCCTTCTTCAACTGGCGGTATTGCGGATGGGGCCTGGAGGCCAGTGGGTGATATTGAATTGCGCAGCCAAATATCAGACCCGGATGGCGCAGAAAAATACCCAGAACTGCAAATTGCACGTTGGCGGGATGAAGGAGATGCTCGTGGTTGGGGTATTGCACCGGGCAATCCGGATAACTCATCTTTGATTAATGGCGCAATTTCGGAGTTATCATCGCGCGGTGGTGGCGAGTTATTGTTCCGTGTTCCCGGTGTGCTCCTGATCAAAGGGCCAATAGTTCCTCGTCGCGGAGTTATCTGCAAAGCCTCACCCGGAACTGTGACCATTAAACTGGCGGATAACTCAAATACAGGCATGGTGGAGAGTTATAAGTTTGACACGTTGCGAGCAAACAGCGCGCATTCTATCGCCGACGATCCTGATTTCACACAGGATTACGGATTTGATGGTTTTATCTTTGACGGTAACGGAGCAAATCAGAGCAAAGCTACGTTGAATTATGGCGTTAAAATGTATGGTCTCCGCTTAACGCTCAAACGTTGCATTATTTATAACTTCGCTGGAATTGGTTTGTTGACATCTCACGCTGGTGCGGGCAGCGGTGCATATACGATTGATAAAGCGTCCATTCCTGCCTGTATTGATGAACTGGAGATCATAAATAGCTTTGATGAGAACTGGATTTACGAAGGGCCATCAGACACACCAATTGGCTCCGTCGTCACTAACGAGAATGGCGATAAAAACAACCCTGGCACCACACCACAAACATCACGGCATTTCCCGGGGGAGCCAGTTCACAGTGTGGTTGTTGCAGCAAACAAAGCCATGCAGGCTGATTACCTGAATTTAAACTCCCCCCGTTTTGGTAAGTGTTTTGTGGCGAAGGACAATACACGTCTGACCATTGATACACTAATCACCGCCGGTGGCTGGGGAAATGTGGAATTTGGTGTGAACTGTAACGGAGTGGTAAAAAATAACTTCAGCCAGGCCAACAAAATTAACTGGGGAGGTGTTACTAAGCCGTTTGTACTTAATTATTCTAACAAACTGGTAATCACCGACACCATTATTCGCCGGGCATCTGGACAGGATGTTGGAGCAGATGGCGTATTTGATACTGGCGGGGCAAACTGGGGGACGGTTGCAAACCTGCAAGCAGCAACTCAGGGCGGGCATTTGTTTGTCGCTGACGCCGTGAGCATCATGATTGGTCAATTAAAATCGGTCGGTATTGGTGGGTTAGGTAGTGATGGTTTGGTATCGGCAGCACTGGTGACGACAGAAAACTGCGATCAGCTTAACTGTACGATGACCTTTTCGAACGTTTCACTTGCGTGGCGAAACAAGAAGAATGGACTGATTGGCAATTTCATTGCCACTGGGGACGTTGGCACCGGCAACAATTTTGCAGAGGGATTAACCGGCACTCCAGCCCTGAACAAGTCATCATTGATGACGATGCAGGCGGTATTCAAGGATGGAACCGGCACAGTTAAAACAAATAACTTTATCGGCTATGGCAATATCGATCTGACTTCAACAGGCGGTAAAACCGTAACAATCCCTCACACGTTATGGCGAGCGCCCTCTGTCGAAGAGATTCAGGCGACACTCCGGCATAGTTCATTTACGGCGCCAGGTACATTTTCACCGGTTTACATCAGCTCATTTAACGCCACACAGGTGGTACTGAGAGTTGACGTAACTACTGCGGCTACCGGCACGCCTGTCTCACAGGTTGTATGCCGTATTAATTGA

Genome Context

Tertiary structure

XPO97406.1
ESMFold structure
Source ESMFold
pLDDT 73.0
Oligomeric state monomer
Download structure