Protein

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Genbank accession
XXK86171.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAFHFDALSNYDIQTSYEEFKTLRRTVHRRTNYTDSIINAQTPSSISLAINFSNTLTEANFFEWLGFDRKGNTFLLPLYSSNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEVMSYSPVIASTNGSILPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVTEMNASATISLYYLKRFAGDMVYNIEPETDVPLTIRNNNISIDFPSARITKRLEFSDVYRVEWDIIPTASSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34377,34120 Da
isoelectric point:5,06580
aromaticity:0,13378
hydropathy:-0,22977

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
XXK86171.1
1 299
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXK86171.1
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,6290
Central domain 288 288 2 0,7647
C-terminal 289 299 10 0,4987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-288
C-terminal
289-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage WP85
[NCBI] 		3446685 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXK86171.1 [NCBI]
Genbank nucleotide accession
PV844355 [NCBI]
CDS location
range 9334 -> 10233
strand +
CDS
ATGTACTACTCTCTAATGAGAGAGTCAAAAGTTATAGTTGAGTATGACGGTAGGGCATTTCATTTTGATGCCCTATCAAACTATGATATACAGACTTCCTACGAGGAATTCAAGACTCTTCGTAGGACTGTTCATCGTAGAACTAACTATACAGACTCTATTATAAATGCTCAAACTCCCTCTTCTATCTCTCTAGCAATAAATTTCAGTAATACTCTTACCGAGGCTAACTTCTTTGAATGGTTAGGTTTTGATAGAAAAGGTAATACTTTCTTACTCCCACTATATAGTAGTAATATTGAACCTATTATGTTCAATATCTATATAGTAAACAAAGATAATAACTGTGTATATTTTGAAAACTGTTATGTATCTACAGTAGATTTTTCTTTAGATAAGAACATACCAATTCTTAATGTTGGTATTGAGTCTGGAAAATTCTCAGAAGTATCTACGTATAGGGAAGCAGCTTCTATTATACAGGGTGAAGTAATGTCTTACAGCCCAGTAATAGCTTCTACTAATGGCAGCATCTTACCCGGTCTTATTTCTGCCTCTTTATCTTTCCAACAGCAGTGCTCCTGGAGAGAGGATAAGAGTGTTTTTGATATAAATAAAATTTATAATAATAAAAGAGCCTATGTAACTGAAATGAATGCTTCGGCAACCATTTCTCTATACTACTTAAAACGTTTTGCAGGAGATATGGTTTATAATATAGAACCGGAGACAGATGTACCTTTAACGATAAGAAATAATAATATTTCTATAGATTTTCCTTCAGCACGTATTACAAAACGCCTAGAGTTCTCAGATGTGTATAGAGTTGAGTGGGATATTATACCTACTGCTTCTTCAGACCCAGTGAGAATAGATTTCTTTGGAGAAATTAAAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ed0fe6b363331f925c03741e18af9cca764e26e786858ef7a2f9f3aaf8b972a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8178
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50