Protein

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Genbank accession
YP_009885500.1 [GenBank]
Protein name
neck passage structure
RBP type
TF
Evidence RBPdetect2
Probability 0,70
Seq2Symm
C3 confidence 0,996
C3 0,996
C1 0,031
C2 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSLDNFRNRTIIWDTVNKDFPQPIQIMQGDVNARTLLIKIVDNGVEIDLTGHSLKLTYQYTNSSNSGFVMIPPNNLTKGEFILVIPTEMTKAGVIEANLILLNKDKEQVIVSKNLTFISDSSTVSDLAQEINNNIDDFTKLLLEKMPQVLRSELNDLHAQTDSNKSNIDLKANLADMTSLQSAMTELKNEVEAFGISPENLVTIKSLLDAIASNASESEVVELINSVKVLTSNISLMSNGDYSPKANQTDLESLQHTVNDHSATVSTKANQTDLDNLQAKVDKTETDVKTAITKATEAQANSLPLNGNAVSASKLETARKLRVNLQTSAFQNFDGTADATNIGIVGSLPIVNGGTGNSSAYAYGLNCNSNTTDFSSGMKIYTRAVNTNQANMFILQSVWAKNAPAAGVYIVICSVTKYNGNGNMSMTALANGTIYTAVVPYTYTEPTTTTQAIYTTTATPNWVKILDTNGKGIDYAQAHPVGSVVSNASGSSSGYSAGKWENIGSAVIGSTTVYYWKRTT
Physico‐chemical
properties
protein length:520 AA
molecular weight: 56029,14830 Da
isoelectric point:5,06807
aromaticity:0,06154
hydropathy:-0,20981

Taxonomy

Phage
Lactococcus phage CHPC361 [NCBI] · taxon 2675249
Uroviricota Caudoviricetes Skunavirus Skunavirus CHPC361
Host
Lactococcus lactis [NCBI] · taxon 1358
Bacillota Bacilli Lactobacillales Streptococcaceae Lactococcus Lactococcus lactis

Coding sequence (CDS)

Genbank protein accession
YP_009885500.1 [NCBI]
Genbank nucleotide accession
NC_049481 [NCBI]
CDS location
range 7162 -> 8724
strand +
CDS
ATGAGTTTAGATAATTTTAGAAATAGAACAATTATATGGGATACAGTTAATAAAGATTTCCCTCAACCAATACAAATAATGCAAGGCGATGTCAATGCAAGAACTTTGTTAATTAAAATAGTTGATAATGGAGTTGAAATTGATTTAACTGGTCATTCGTTAAAACTTACATATCAATACACTAATAGTAGTAATTCTGGTTTTGTTATGATTCCTCCTAATAACTTAACTAAAGGAGAGTTTATTTTGGTAATTCCTACCGAAATGACAAAAGCTGGAGTTATTGAAGCGAACTTAATACTTCTCAATAAAGACAAAGAGCAAGTTATTGTCAGTAAGAATCTTACATTTATATCAGACAGTTCTACTGTTTCTGATTTAGCTCAAGAAATAAATAATAATATTGATGATTTTACGAAATTATTATTAGAAAAAATGCCACAAGTACTGCGTAGTGAGTTGAATGATTTACATGCTCAAACTGATTCAAACAAGAGTAATATTGATCTTAAAGCAAATTTAGCTGATATGACTAGCTTACAAAGTGCAATGACAGAGCTAAAAAATGAAGTAGAAGCATTTGGTATTAGTCCTGAAAATTTAGTTACTATAAAATCGCTATTAGACGCAATCGCAAGTAACGCCAGTGAATCAGAAGTAGTTGAACTAATAAATTCAGTAAAGGTTTTAACAAGTAATATTTCTCTGATGAGTAACGGAGATTACTCCCCTAAAGCTAATCAAACAGATTTAGAAAGTTTACAGCATACTGTTAATGACCATTCAGCAACTGTTTCAACAAAAGCCAATCAAACGGACTTGGATAACTTACAAGCAAAGGTAGATAAAACTGAAACTGATGTAAAAACTGCAATAACAAAGGCAACTGAAGCACAAGCGAACAGTTTACCACTTAATGGCAATGCGGTCAGTGCAAGTAAACTGGAAACAGCTAGAAAACTTAGGGTAAATCTTCAAACTTCGGCATTTCAAAACTTTGATGGGACTGCTGACGCAACTAATATTGGTATTGTAGGGTCACTTCCTATTGTAAATGGTGGTACTGGTAATTCAAGCGCTTATGCTTATGGATTAAATTGTAATAGTAATACAACTGATTTTAGTTCTGGAATGAAGATTTATACTAGAGCTGTCAACACAAATCAAGCTAATATGTTTATATTGCAATCTGTATGGGCTAAAAATGCACCGGCAGCTGGAGTGTATATAGTGATTTGTAGCGTTACAAAGTATAATGGTAATGGAAATATGAGTATGACTGCTCTAGCAAATGGAACAATTTATACTGCGGTAGTTCCTTATACTTATACTGAGCCAACTACAACTACTCAAGCCATTTATACTACTACGGCTACACCAAATTGGGTTAAAATTTTGGATACAAATGGAAAAGGCATTGACTATGCTCAAGCACACCCAGTTGGTTCCGTGGTATCAAACGCTTCAGGCTCATCATCAGGATATTCCGCAGGAAAGTGGGAAAATATCGGTTCAGCAGTAATTGGTTCAACAACAGTTTATTATTGGAAACGTACTACATAA

Genome Context

Tertiary structure

YP_009885500.1
ESMFold2 structure
Source ESMFold2
pLDDT 65.8
Oligomeric state monomer
Download structure