Phage RBP Database

Genbank accession

APC46388.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,39

Seq2Symm

I confidence 0,823

I	0,823
C1	0,431
C2	0,084

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MSTPTAPGSTGYGVDIYGTILYGASQQRTYSVEPVLISQTDYGRLSLSWQSPKDEDWRRLRLVRNTDGYPSTPDDGTVVLEATMESIRTSFEDVGLAQGYIYYYTVFMSQEAPDWSSFTEYPEGAVVLNDGIYWLCISEGNAGHEPVQGSGFWVGTTYKPQWYPAGTTAALAIKDQKYTERLYNRTPQPYKIVTSDLFANIDIDNPMLFKYLSLFGFALNDIKTEYDNLLLLNDPDYVSAANLEKLGRQFGLETDYISSPRLRRARVRNISTNYRLKGTEQSIYNAIASVTGWTSDIEIGYNKMLNADQAMFESIKYPDWKSGNRYFLNDFVRYNGYQYKCLASTTTSAPPGGGTSDGNWQVQLNVLEDVTLGNPMTRGVSTWVGGFFGPAGTYTAEYFQIHGVLNPLVGGDFTTNGLAYRAVTGTPITGITGLQSVGRITASPWSNATNYVTNNYVTVGLIYYRAVKPSGPGTPYGPINPGTNDAFWVFETYLDFGPAGRAQFVKDTIPLPLVKKWNTVFEFKSGEEVEYNGKIYIALADTLNYQPSGSYTSNLVWQYDRPAEQAFTSSHYSRRMTSATNVQANSNIIWYDDDGNEMHQSRLPTAATQFVRFDSDYANLNGNTDNQLGQAWVGVPVATTLWESVYGQARVNPEAFQALGSKPKYTYIHLADTRDNAVLAFTYGVDYEDTTNYENGVLFRRTGTNFWFMTRTRLVLYNGGVETVKATWPRISDWDRVRITILNNRVTVEKYFRSPNHNAGEDVSLLADVPDSTLGSPVSGYGIIQRYALGV

Physico‐chemical properties

protein length:	791 AA
molecular weight:	88408,23510 Da
isoelectric point:	5,05875
aromaticity:	0,13527
hydropathy:	-0,38698

Domain architecture

APC46388.1

1 791 aa

STR 35–118 · CBM 119–161 · ATT 317–363 · STR 440–583 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR013783
STR

IPR013783 IPR036573 G3DSA:2.10.10.90

IPR003610
CBM

IPR003610 IPR003610 G3DSA:2.10.10.90

G3DSA:2.10.10.20
ATT

G3DSA:2.10.10.20 IPR003610

APC46388.1

1791 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1214
STR

DC_1214 DC_1794

APC46388.1

1791 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR013783	STR	IPR013783	35	118	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003610	CBM	DC_0028	112	161	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
IPR036573	STR	IPR036573	315	363	Merged direct domain	Carbohydrate-binding module superfamily 5/12	Central	Low	Positional only	2 proteins / 2 hits
IPR003610	CBM	DC_0028	317	363	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:2.10.10.20	ATT	G3DSA:2.10.10.20	317	363	Merged direct domain	G3DSA:2.10.10.20	N-terminal	Low	Positional only	19 proteins / 19 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	440	583	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	444	583	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
IPR003610	CBM	DC_0028	514	560	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits

Proteins with similar domain architecture

Phage

Streptomyces phage BRock [NCBI] · taxon 1913591

Uroviricota Caudoviricetes Borockvirus Borockvirus brock

Host

Streptomyces sp. [NCBI] · taxon 1931

Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp.

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)