Protein

View in Explore
Genbank accession
UYE98685.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSIRFNHAAGTITSTDTATIVIEGGTPTVPRPLRLNASSVVFPNKVLPIGEAGAVVFDTTSKTLKYHNGISWVELLSQDDILAPVNVSLTNIYNQLANRVSTVTYSSSSVASASVSGTNLNIVFPTSTSGGGSAVPGLFTSSPPGSIMQYALTSGQSVASIREQLSGVSGGQSGRNGTQAAPFVTKTGWCFSDGLWWTWNGTTTITKQVPNLNQEAYLKGITTSGVTKTDSVIAGSGSISSATITMPEHYHGVGSMNAISGSGADDGTFIIGRAWNDGNSYTGLTITGDNQFRMQRTINSSDSRLAFTTSSPIYPNGNTSTHNHSLTGIDVAHFNVAMLYNIAEPSLALNQDAGDARYVLKSGDVMTGSLTIANSAAIRANDTNLVFWFQNSSGGERAAIYHSSSTNTLRLRSAGGSEVSISNTGVLTASGLVISSQTGTVGGRNIVRAINGTTADANGNVTLSITGGVVTNERRGAEIATEREPLGHESFVYRASEGCFVTGFSIHSSGGSQDEFVWIYSRPVQILIDGTWRTISDV
Physico‐chemical
properties
protein length:538 AA
molecular weight: 56289,64110 Da
isoelectric point:6,06179
aromaticity:0,07249
hydropathy:-0,08290

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
UYE98685.1
1 538 aa
Domain Start End Length (AA) Confidence
N-terminal 1 207 207 0,4330
Central domain 208 406 200 0,2898
C-terminal 407 538 131 0,9493
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Xanthomonas phage XbC2 [NCBI] · taxon 2978503
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Xanthomonas vesicatoria [NCBI] · taxon 56460
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales

Coding sequence (CDS)

Genbank protein accession
UYE98685.1 [NCBI]
Genbank nucleotide accession
OP292654.1 [NCBI]
CDS location
range 186187 -> 187803
strand +
CDS
ATGAGTATAAGATTTAATCATGCGGCTGGAACTATTACTAGTACTGATACCGCAACTATAGTCATTGAAGGTGGAACACCAACGGTTCCACGTCCATTAAGACTTAACGCATCATCTGTTGTATTTCCTAATAAGGTTCTTCCAATTGGTGAAGCTGGTGCTGTCGTATTCGATACTACCTCAAAAACATTAAAATATCACAATGGAATTTCATGGGTTGAGCTATTATCACAAGATGATATTTTAGCTCCTGTTAATGTCTCATTGACTAACATTTATAACCAACTTGCTAATCGTGTTAGTACTGTAACATATAGTTCAAGTTCAGTAGCTTCCGCTTCTGTTAGTGGAACTAACTTGAATATCGTATTTCCTACTAGTACTAGTGGTGGTGGGTCTGCTGTTCCTGGATTGTTTACATCTTCACCTCCTGGTAGTATAATGCAATACGCATTAACCTCTGGTCAATCTGTTGCTAGTATTCGTGAGCAGTTGAGTGGTGTGTCTGGTGGACAATCTGGACGTAATGGTACACAAGCAGCACCATTTGTTACAAAAACTGGTTGGTGTTTTAGTGATGGTCTGTGGTGGACTTGGAATGGTACAACAACAATAACTAAACAAGTACCTAATCTTAATCAAGAAGCTTATCTAAAGGGTATTACAACCAGTGGTGTAACTAAAACTGATTCAGTGATCGCTGGATCAGGGTCTATTAGTTCTGCTACCATAACAATGCCTGAGCACTATCACGGTGTTGGTTCCATGAATGCAATTAGTGGTTCAGGGGCTGATGATGGAACATTTATTATTGGTAGAGCCTGGAATGATGGTAATTCATATACTGGTTTGACGATAACTGGTGATAACCAATTTAGAATGCAACGTACTATCAATAGCTCAGACAGTCGTTTAGCTTTTACCACATCATCGCCAATTTATCCTAATGGTAATACCTCAACTCACAATCATAGCCTAACTGGAATTGATGTGGCACACTTTAATGTTGCCATGCTTTATAATATCGCAGAACCAAGTCTTGCGTTGAACCAAGATGCGGGTGATGCTCGATATGTTCTAAAATCTGGTGATGTAATGACTGGTTCATTAACTATTGCTAACAGTGCTGCTATTCGTGCTAACGATACTAACCTAGTATTCTGGTTCCAGAATAGTTCTGGTGGTGAACGTGCTGCTATCTACCATAGCTCTAGTACTAACACATTGCGTTTACGTAGTGCTGGTGGTTCAGAAGTTTCAATATCTAATACTGGTGTTTTAACAGCATCAGGTTTAGTTATTAGTAGCCAAACTGGTACTGTTGGTGGTAGAAATATCGTTAGAGCAATTAATGGAACAACCGCTGATGCTAATGGTAACGTTACACTAAGCATTACTGGTGGAGTTGTAACCAATGAACGTCGCGGTGCTGAAATAGCAACTGAACGGGAACCTTTAGGTCATGAATCTTTTGTATATCGTGCTTCTGAAGGATGTTTTGTAACTGGTTTCTCCATTCATTCAAGTGGTGGTTCACAAGATGAATTTGTATGGATATATTCAAGACCAGTACAAATATTAATTGATGGAACATGGAGAACAATTTCAGATGTTTAA

Genome Context

Tertiary structure

UYE98685.1
ESMFold structure
Source ESMFold
pLDDT 52.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi-Rangel,L., Villicana,C., Leon-Felix,J., Amarillas,L., Carrillo-Fasio,A. and Lightbourn-Rojas,L. 2024-07-15 — GenBank