Protein

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Genbank accession
UYE98685.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MSIRFNHAAGTITSTDTATIVIEGGTPTVPRPLRLNASSVVFPNKVLPIGEAGAVVFDTTSKTLKYHNGISWVELLSQDDILAPVNVSLTNIYNQLANRVSTVTYSSSSVASASVSGTNLNIVFPTSTSGGGSAVPGLFTSSPPGSIMQYALTSGQSVASIREQLSGVSGGQSGRNGTQAAPFVTKTGWCFSDGLWWTWNGTTTITKQVPNLNQEAYLKGITTSGVTKTDSVIAGSGSISSATITMPEHYHGVGSMNAISGSGADDGTFIIGRAWNDGNSYTGLTITGDNQFRMQRTINSSDSRLAFTTSSPIYPNGNTSTHNHSLTGIDVAHFNVAMLYNIAEPSLALNQDAGDARYVLKSGDVMTGSLTIANSAAIRANDTNLVFWFQNSSGGERAAIYHSSSTNTLRLRSAGGSEVSISNTGVLTASGLVISSQTGTVGGRNIVRAINGTTADANGNVTLSITGGVVTNERRGAEIATEREPLGHESFVYRASEGCFVTGFSIHSSGGSQDEFVWIYSRPVQILIDGTWRTISDV
Physico‐chemical
properties
protein length:538 AA
molecular weight: 56289,64110 Da
isoelectric point:6,06179
aromaticity:0,07249
hydropathy:-0,08290

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE98685.1
1 538
Domain Start End Length (AA) Confidence
N-terminal 1 207 207 0,4330
Central domain 208 406 200 0,2898
C-terminal 407 538 131 0,9493
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-207
Central
208-406
C-terminal
407-538

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XbC2
[NCBI] 		2978503 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE98685.1 [NCBI]
Genbank nucleotide accession
OP292654.1 [NCBI]
CDS location
range 186187 -> 187803
strand +
CDS
ATGAGTATAAGATTTAATCATGCGGCTGGAACTATTACTAGTACTGATACCGCAACTATAGTCATTGAAGGTGGAACACCAACGGTTCCACGTCCATTAAGACTTAACGCATCATCTGTTGTATTTCCTAATAAGGTTCTTCCAATTGGTGAAGCTGGTGCTGTCGTATTCGATACTACCTCAAAAACATTAAAATATCACAATGGAATTTCATGGGTTGAGCTATTATCACAAGATGATATTTTAGCTCCTGTTAATGTCTCATTGACTAACATTTATAACCAACTTGCTAATCGTGTTAGTACTGTAACATATAGTTCAAGTTCAGTAGCTTCCGCTTCTGTTAGTGGAACTAACTTGAATATCGTATTTCCTACTAGTACTAGTGGTGGTGGGTCTGCTGTTCCTGGATTGTTTACATCTTCACCTCCTGGTAGTATAATGCAATACGCATTAACCTCTGGTCAATCTGTTGCTAGTATTCGTGAGCAGTTGAGTGGTGTGTCTGGTGGACAATCTGGACGTAATGGTACACAAGCAGCACCATTTGTTACAAAAACTGGTTGGTGTTTTAGTGATGGTCTGTGGTGGACTTGGAATGGTACAACAACAATAACTAAACAAGTACCTAATCTTAATCAAGAAGCTTATCTAAAGGGTATTACAACCAGTGGTGTAACTAAAACTGATTCAGTGATCGCTGGATCAGGGTCTATTAGTTCTGCTACCATAACAATGCCTGAGCACTATCACGGTGTTGGTTCCATGAATGCAATTAGTGGTTCAGGGGCTGATGATGGAACATTTATTATTGGTAGAGCCTGGAATGATGGTAATTCATATACTGGTTTGACGATAACTGGTGATAACCAATTTAGAATGCAACGTACTATCAATAGCTCAGACAGTCGTTTAGCTTTTACCACATCATCGCCAATTTATCCTAATGGTAATACCTCAACTCACAATCATAGCCTAACTGGAATTGATGTGGCACACTTTAATGTTGCCATGCTTTATAATATCGCAGAACCAAGTCTTGCGTTGAACCAAGATGCGGGTGATGCTCGATATGTTCTAAAATCTGGTGATGTAATGACTGGTTCATTAACTATTGCTAACAGTGCTGCTATTCGTGCTAACGATACTAACCTAGTATTCTGGTTCCAGAATAGTTCTGGTGGTGAACGTGCTGCTATCTACCATAGCTCTAGTACTAACACATTGCGTTTACGTAGTGCTGGTGGTTCAGAAGTTTCAATATCTAATACTGGTGTTTTAACAGCATCAGGTTTAGTTATTAGTAGCCAAACTGGTACTGTTGGTGGTAGAAATATCGTTAGAGCAATTAATGGAACAACCGCTGATGCTAATGGTAACGTTACACTAAGCATTACTGGTGGAGTTGTAACCAATGAACGTCGCGGTGCTGAAATAGCAACTGAACGGGAACCTTTAGGTCATGAATCTTTTGTATATCGTGCTTCTGAAGGATGTTTTGTAACTGGTTTCTCCATTCATTCAAGTGGTGGTTCACAAGATGAATTTGTATGGATATATTCAAGACCAGTACAAATATTAATTGATGGAACATGGAGAACAATTTCAGATGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2b23780c41d5d35fb4eb838371b4e4c23a67e40c99e0ff3caaf7c30db69bffed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5283
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi-Rangel,L., Villicana,C., Leon-Felix,J., Amarillas,L., Carrillo-Fasio,A. and Lightbourn-Rojas,L. 2024-07-15 — GenBank