Protein

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Genbank accession
YP_009822995.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAYPDFDPLWAIEDTYLDGVTPNKIRPDEPLRNYGYLPDAEPTAQELNWQLNNVYQQLAELKTIALGAYETPVNELKIIVGDNRNPATIYGYGTWVPFAQGRTLIGAGTGTDTNGVQRSYSEGSTGGTYEEVISKSQLPAHEHSYEDSYLFEAAGSVSGVPTTNKKNVGFINGGFGSGDTDADNNTLVFRNNTTGSVGGNQPTNNVQPYVAVFIWRRTA
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23868,83010 Da
isoelectric point:4,52316
aromaticity:0,10959
hydropathy:-0,52877

Domains

Domains [InterPro]
Coil
44–64
Coil IPR053827
SSF88874
95–213
SSF88874
YP_009822995.1
1 219
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rheinheimera phage vB_RspM_Barba18A
[NCBI] 		2565657 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009822995.1 [NCBI]
Genbank nucleotide accession
NC_048189.1 [NCBI]
CDS location
range 69833 -> 70492
strand +
CDS
ATGGCATACCCAGATTTTGATCCTCTTTGGGCAATAGAGGACACATACCTTGATGGTGTGACGCCCAACAAAATTAGACCAGATGAGCCTTTACGTAATTATGGTTATTTACCTGATGCGGAACCAACAGCACAAGAATTGAACTGGCAGTTGAATAATGTCTATCAACAGCTTGCTGAATTAAAGACCATAGCGCTAGGTGCTTATGAGACACCAGTAAATGAGTTAAAGATTATTGTTGGTGATAACCGCAATCCAGCTACTATTTATGGCTACGGCACTTGGGTTCCTTTTGCTCAGGGTCGCACACTGATTGGTGCAGGTACAGGCACAGATACTAATGGTGTTCAGCGTTCATACTCTGAAGGCAGCACAGGTGGTACTTACGAAGAAGTGATTAGTAAGTCACAATTACCTGCTCACGAACATAGTTATGAAGATAGTTACTTGTTTGAAGCTGCCGGAAGTGTCAGCGGTGTCCCAACTACTAACAAGAAGAATGTCGGGTTTATTAATGGTGGTTTTGGTAGTGGCGACACCGATGCTGATAACAACACCTTAGTATTCCGTAACAATACAACAGGTAGTGTAGGCGGAAATCAACCTACTAATAATGTGCAACCATACGTTGCCGTATTTATCTGGCGGAGAACAGCATAA

Tertiary structure

PDB ID
c52c9dc0b5ed874c5fdb83ea55e2be7e6787116eace7566a1e8ed5585e879014
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7429
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and seasonal variations among aquatic phages infecting the Baltic Sea Gammaproteobacteria Rheinheimera sp. bal341 Nilsson,E., Li,K., Fridlund,J., Sulcius,S., Bunse,C., Karlsson,C.M.G., Lindh,M., Lundin,D., Pinhassi,J. and Holmfeldt,K. 2019-09-15 — GenBank