Protein

View in Explore
Genbank accession
YP_009005441.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MATNTLNHISDESKYKTFNPAGTSFPANITNVQSALAALKPIAVNGVPDATETVKGIIRIATQQEVNDGDSANTVVTPKTLKERLGNPQASTTVIGLTRYATTAEATAGSIGNAAVVPTGLKASIDNAFATRISKESVLGVIKIATVAMAEAGTDDTSAMTPLKTQRAIAKATAVLPVYGPATESVSGTVRIATNGQVAQGTLRDGYAVSPSGLASLTATSSRRGLARSATIAEVNANTAGDIFVTPNGLNQRVGTTSTKGLVKLTTTVGSGDANTALAYNADVVHTRGGQTINGTTTFGAARVNGRLDVGSGFINNQQIATVNMLVDSVPIGTIIMWPGHNPPSSDWMHCHGALLNKGDAQYSTLYSIIGTIYGGDATRFALPDMRGMFPRGVGKSNIMNQYSGNDSKGKPGLGAGCGNASLGQSMPQSVRKHKHESGWGEHHKRNEARNGCTVRNGYVGSNRTDYDNYKWFTNDGSEVEAANIRDGFGTMNTEGLMGDENRPWSIALNFVIKVR
Physico‐chemical
properties
protein length:516 AA
molecular weight: 53953,77070 Da
isoelectric point:9,24253
aromaticity:0,05426
hydropathy:-0,26764

Domains

Domains [InterPro]
DC_0176
STR
1–448
DC_0176
SSF69349
STR
246–342
SSF69349 IPR044916
G3DSA:2.10.280.10
Unmapped
246–283
G3DSA:2.10.280.10 IPR037053 IPR027448
IPR015173
STR
248–299
IPR015173 SSF88874
IPR011083
ATT
333–391
IPR011083
YP_009005441.1
1 516
Architecture
STR
ATT
STR
STR 1-318 | ATT 319-391 | STR 392-515 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage PG7
[NCBI] 		1455074 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Karamvirus
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009005441.1 [NCBI]
Genbank nucleotide accession
NC_023561.1 [NCBI]
CDS location
range 94926 -> 96476
strand +
CDS
ATGGCTACTAATACTCTAAACCACATAAGTGACGAATCAAAATATAAAACATTTAACCCGGCTGGAACTAGTTTTCCAGCCAACATAACAAACGTTCAATCAGCATTAGCCGCATTAAAGCCAATAGCAGTTAACGGCGTTCCTGACGCAACTGAAACTGTTAAAGGAATAATTCGTATTGCTACACAGCAAGAAGTTAATGATGGTGATTCAGCTAATACTGTAGTTACTCCAAAAACTTTAAAAGAACGTCTTGGTAATCCGCAAGCTTCTACTACAGTAATTGGTTTAACTCGATATGCTACTACAGCTGAAGCCACTGCGGGGTCTATTGGCAATGCTGCGGTTGTTCCGACTGGATTAAAAGCTTCAATTGACAATGCGTTTGCTACTCGTATTTCTAAAGAGTCAGTTTTAGGTGTAATTAAAATTGCTACAGTTGCAATGGCTGAAGCCGGTACTGATGATACCTCGGCAATGACTCCATTGAAAACCCAAAGAGCAATTGCAAAAGCAACAGCAGTTCTTCCAGTTTATGGACCAGCGACAGAATCAGTAAGTGGTACTGTGCGTATTGCTACTAACGGGCAAGTTGCTCAAGGAACTCTAAGAGACGGGTATGCCGTATCTCCAAGTGGATTAGCCTCTTTAACAGCTACATCTTCTCGCAGAGGTTTAGCTCGTTCCGCTACTATCGCCGAAGTTAATGCAAATACCGCCGGAGATATTTTTGTTACTCCAAATGGATTGAACCAAAGAGTTGGTACTACTTCAACAAAGGGTCTTGTTAAATTAACTACTACTGTAGGCTCAGGTGACGCAAATACTGCATTAGCATATAACGCTGACGTTGTTCATACTCGCGGCGGACAAACAATTAATGGAACCACAACGTTTGGTGCTGCGCGAGTAAATGGTCGTCTTGATGTTGGTTCTGGTTTTATTAACAACCAGCAAATTGCTACAGTAAACATGTTAGTTGATTCCGTTCCAATTGGAACAATTATCATGTGGCCAGGACATAACCCTCCAAGCTCAGATTGGATGCATTGCCATGGAGCGTTATTGAATAAAGGAGATGCCCAATATTCTACGTTGTACAGCATTATTGGCACTATATACGGTGGAGACGCTACTCGGTTCGCTCTTCCTGATATGCGCGGTATGTTCCCTCGCGGTGTTGGTAAGTCCAACATCATGAACCAATATTCAGGAAACGACTCAAAAGGTAAACCTGGTCTTGGCGCTGGGTGTGGTAACGCTTCATTAGGTCAATCAATGCCGCAATCTGTTCGTAAACATAAACACGAGTCGGGTTGGGGAGAGCATCACAAACGCAATGAAGCTCGTAATGGCTGTACTGTAAGAAATGGTTATGTAGGGTCTAATAGAACTGACTACGATAACTATAAGTGGTTTACTAACGACGGTAGTGAAGTAGAAGCTGCTAATATTCGTGATGGATTTGGTACAATGAATACAGAAGGTCTAATGGGCGATGAAAACCGTCCTTGGTCAATTGCTCTAAACTTTGTAATAAAAGTAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e18abf88b095b171587d7ed7c0d6128537a897df01200c84f1fd9aaa1745cbe2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7020
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Potential Antibacterial Agent, phage PG7, for the Treatment of Enterobacter cloacae Infection in Mice Wang,S.W., Jin,J., Chen,S.J., Zhang,G., Li,Z.J., Li,Y.H., Wang,X.T., Wang,J., Wang,S.M., Wang,Z.Q. and Zhao,G.Q. 2018-02 — GenBank