Phage RBP Database

Genbank accession

CAA2409780.1 [GenBank]

Protein name

Putative phage tail protein

RBP type

TSP

Evidence RBPdetect

Probability 0,90

Protein sequence

MIPEGTLSTKSVVSATADPVKQPGDFLVDWERAGKNLNDPSEGLLVKLWTLSVDTVDEVQQVKVSAPGVDEIVLFTGTEITEASLAFDQNMRPFVAFVQANQAKIYWYDSSVPGQITTVLPAGIKTPRCTTDEKREWHTAISDIVLSYIRAGNLCVRYQRERYQIEHVLKGVGSTAELVSVGVNAGGRLQFRCRKVSNIDSQFSVNADPYLADVVMALCLRSGISPERINVSELYDQAVIGYKINTKDGTNARIDALRKIFFFDKSERDGILFFPRRGREISARIPYVHLVADDPSALGVTLVQESELPAEVNVTHLDPEGGFANNKQTVRRKSNLVKTTKKIDVESEVVLTADQAATTALITSVSAWGEPQKFKFKTGLQYAELVAADTVEVEDKNGNWHIVRITERNEDRSVIGFEGVSDAQELYASLGVGRPLTPPVSTTPGLIGPTRIEILNIPCLRDQDDELGVYLGVCGESSGWYGSSILVATDGANFTEALTIETPATIGDTTTEMLAEISAEYPGNQAVEVLTNYPLESVSYENLLSGMNRCVIGDEVLQFQFANFLGMSGALYHYKLVGLVRGRYATGVEAWPQNTRFVLLDSSIAFMQAQQWMLGREIQIKPVSLGLTEDETIETEYDYSEGVSQREFPVTQVTATRDGSNNVSVAFVGRPRLGIETAPRNGKYFAGYRVKFSNGNTIDTFEMAASYPSAPAGISVQICALNSVTGEGPYSTPIMV

Physico‐chemical properties

protein length:	736 AA
molecular weight:	80586,97890 Da
isoelectric point:	4,85146
aromaticity:	0,08288
hydropathy:	-0,14429

Domain architecture

CAA2409780.1

1 736 aa

ATT 251–407 · RBD 504–600 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR032876
ATT

IPR032876 IPR056490

IPR056490
RBD

IPR056490

CAA2409780.1

1736 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1657
STR

DC_1657 DC_2254 DC_2280

CAA2409780.1

1736 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR032876	ATT	DC_0307	251	407	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR056490	RBD	DC_0637	504	598	InterPro cluster	Rcc01698-like, C-terminal domain	C-terminal	Low	Positional only	42 proteins / 42 hits
IPR056490	RBD	DC_0637	504	600	InterPro cluster	Rcc01698-like, C-terminal domain	C-terminal	Low	Positional only	42 proteins / 42 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

CAA2409780.1

1 736 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	119	119	0,5753
Central domain	120	318	200	0,1545
C-terminal	319	736	417	0,0215

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Xanthomonas phage Suba [NCBI] · taxon 2674975

Uroviricota Caudoviricetes Stanbaylleyvirinae Subavirus suba

Host No host information

Genbank protein accession

CAA2409780.1 [NCBI]

Genbank nucleotide accession

LR743530 [NCBI]

CDS location

range 18737 -> 20947
strand +

CDS

ATGATCCCCGAAGGTACACTTTCAACGAAGTCTGTAGTTAGCGCGACGGCCGACCCGGTTAAACAACCGGGCGACTTTCTTGTTGATTGGGAGCGCGCCGGGAAAAATTTGAATGATCCGTCTGAAGGCTTGCTTGTAAAGCTTTGGACGCTTTCTGTCGACACTGTTGACGAAGTTCAACAGGTTAAAGTTTCAGCCCCCGGCGTAGATGAAATTGTTTTGTTTACCGGAACTGAAATTACCGAAGCTTCGCTAGCATTCGATCAAAATATGCGGCCGTTTGTTGCCTTTGTTCAAGCGAACCAAGCCAAAATTTATTGGTACGATAGTTCTGTCCCTGGGCAAATTACGACAGTTCTCCCGGCCGGAATCAAAACGCCGCGTTGCACTACAGATGAAAAGCGCGAATGGCACACAGCAATTTCCGATATTGTTCTTAGCTACATTCGGGCCGGGAATCTTTGCGTTCGCTATCAGCGCGAGCGCTATCAAATCGAACACGTCTTGAAGGGGGTCGGATCGACCGCCGAGCTTGTCAGTGTGGGCGTAAACGCAGGCGGAAGGCTCCAATTTAGGTGTCGTAAAGTCTCAAACATCGACAGCCAATTTTCGGTAAACGCAGACCCGTACCTTGCCGATGTTGTAATGGCCCTTTGCCTGCGTTCCGGAATTTCTCCCGAACGAATCAACGTTTCCGAACTGTACGACCAAGCCGTAATTGGCTACAAGATAAACACGAAAGACGGAACCAATGCGCGAATTGACGCGTTGCGAAAGATTTTCTTTTTCGATAAAAGCGAGCGCGATGGAATACTATTCTTCCCACGTAGGGGTCGCGAGATTAGCGCGCGCATTCCTTACGTGCATCTTGTTGCCGATGATCCTTCGGCGCTTGGCGTCACGCTAGTTCAAGAAAGCGAACTTCCTGCCGAAGTTAACGTTACGCATTTGGACCCGGAAGGCGGTTTTGCAAACAACAAGCAGACCGTTCGCCGTAAAAGCAATTTGGTAAAAACCACAAAGAAAATTGATGTTGAAAGCGAAGTGGTTTTGACCGCAGACCAAGCAGCAACAACAGCGCTAATCACTAGCGTTTCTGCCTGGGGCGAGCCGCAAAAATTCAAGTTCAAAACAGGCTTGCAATATGCGGAATTGGTTGCTGCCGATACCGTAGAAGTCGAAGACAAAAACGGCAATTGGCATATCGTCCGAATCACTGAACGAAATGAAGACCGCAGCGTAATCGGGTTTGAAGGCGTTTCGGATGCGCAGGAGCTTTACGCGTCTTTGGGCGTAGGAAGGCCGCTAACGCCGCCAGTATCCACAACCCCCGGCTTGATCGGCCCTACGCGCATTGAAATTTTGAACATTCCGTGCCTTCGCGATCAAGACGATGAACTAGGCGTTTACCTGGGCGTATGCGGGGAATCTTCAGGTTGGTACGGGTCTTCGATTTTGGTCGCTACCGATGGTGCGAACTTTACCGAAGCTTTGACAATTGAAACCCCGGCAACAATAGGGGACACAACAACCGAAATGCTTGCCGAAATTAGCGCCGAGTATCCAGGCAACCAAGCTGTCGAAGTTTTGACAAACTACCCGCTAGAATCGGTTTCTTATGAAAATTTGCTTAGCGGAATGAACCGGTGCGTAATCGGCGATGAAGTTTTGCAATTCCAATTCGCAAATTTCCTTGGAATGTCCGGCGCGCTGTATCATTACAAGCTGGTCGGATTGGTTCGCGGGCGCTATGCTACAGGCGTCGAGGCTTGGCCGCAAAATACTCGCTTCGTTTTGCTCGACAGCAGTATTGCGTTCATGCAAGCTCAGCAATGGATGCTGGGGCGCGAGATACAAATAAAGCCGGTAAGCTTGGGCTTGACGGAAGACGAAACAATAGAAACTGAATATGACTACAGCGAAGGCGTGTCGCAACGTGAATTCCCTGTAACGCAAGTAACTGCAACTCGCGACGGAAGCAACAACGTTTCAGTTGCGTTCGTAGGTCGTCCCCGGCTGGGAATTGAAACCGCCCCGCGAAACGGCAAGTATTTTGCAGGCTATCGCGTAAAGTTTAGCAACGGAAACACGATAGACACGTTCGAAATGGCGGCTTCTTACCCTAGCGCTCCGGCAGGAATTTCGGTGCAAATTTGTGCGCTTAATTCTGTGACTGGCGAAGGCCCGTATTCAACCCCGATAATGGTGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)