Phage RBP Database

Genbank accession

QVW29307.1 [GenBank]

Protein name

baseplate wedge tail fiber connector

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TSP

Evidence DepoScope

Probability 0,97

TSP

Evidence RBPdetect2

Probability 0,61

Protein sequence

MYIQTPKQLIDVGEIGNASTGDILFDGGVKINNDINAIYNAFGDQRKMATANGTGPNGQIIHATGYYQKGGPTDYFTPVPVGSRHDIDASTGGVIVTVARGELGDSVEFINSNGSISVNNPLSIQALDSIKGVAGNLVITTPYTKVTLRCISSGAGGSIWDYSTESMFSHTEIPVDGTWNIISDYVNIPLFYKTEYNAAKLLVTCQSANGRKIKSCEINILIDTINSRVISTEYAVMRVGNDNEEDEIANISFSIINNFATMTVSSHINGLRVAAKVISTQKIRVAQ

Physico‐chemical properties

protein length:	287 AA
molecular weight:	30811,30440 Da
isoelectric point:	5,22330
aromaticity:	0,07317
hydropathy:	-0,05784

Domain architecture

QVW29307.1

1 287 aa

ATT 1–267 · STR 268–287

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036240
STR

IPR036240

IPR008987
ATT

IPR008987 IPR027412

G3DSA:1.20.5.960
Unmapped

G3DSA:1.20.5.960 IPR027411 IPR056391

QVW29307.1

1287 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036240	STR	IPR036240	1	287	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
IPR008987	ATT	DC_0752	7	168	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
G3DSA:1.20.5.960	Unmapped	-	17	51	Gene3D	Bacteriophage t4 gene product 9 (gp9)	-	-	-	-
IPR027411	Unmapped	-	67	169	InterPro	Baseplate structural protein Gp9/Gp10 middle domain superfamily	-	-	-	-
IPR027412	Unmapped	-	170	282	InterPro	Baseplate structural protein Gp9 C-terminal domain superfamily	-	-	-	-
IPR056391	ATT	DC_0417	171	267	InterPro cluster	Baseplate protein gp9-like, C-terminal	C-terminal	Medium	Text match	98 proteins / 98 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QVW29307.1

1 287 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	51	51	0,9785
Central domain	52	250	200	0,0211
C-terminal	251	287	36	0,9991

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Escherichia phage vB_EcoM_SQ17 [NCBI] · taxon 2834246

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

QVW29307.1 [NCBI]

Genbank nucleotide accession

MW882907 [NCBI]

CDS location

range 86702 -> 87565
strand +

CDS

ATGTATATTCAAACTCCAAAACAATTGATTGACGTTGGCGAAATTGGTAACGCTTCTACAGGCGATATCCTTTTTGACGGCGGTGTTAAAATAAACAATGATATAAATGCTATTTACAATGCGTTTGGTGACCAACGAAAAATGGCAACTGCTAATGGGACAGGACCAAATGGACAAATAATCCATGCCACTGGATACTACCAAAAAGGAGGCCCTACTGATTATTTCACCCCTGTTCCAGTAGGAAGTAGACATGACATAGATGCTTCTACCGGTGGTGTTATTGTTACTGTTGCTAGAGGTGAACTCGGCGATTCCGTGGAATTTATAAATTCAAACGGGTCAATTTCTGTAAACAACCCATTAAGTATCCAAGCATTAGATTCTATTAAAGGTGTTGCAGGTAATTTAGTTATAACTACACCTTATACTAAAGTTACTCTTCGTTGTATTTCTTCTGGTGCAGGCGGTTCAATATGGGATTATTCTACAGAAAGTATGTTTAGTCATACCGAAATTCCTGTAGACGGGACATGGAATATTATTTCAGACTATGTCAATATTCCTCTATTTTATAAAACTGAATATAATGCTGCTAAACTTTTGGTTACATGCCAATCTGCCAACGGCCGAAAAATTAAATCATGCGAAATAAATATTCTAATAGATACAATTAATTCAAGAGTTATTTCAACTGAATACGCAGTGATGCGCGTTGGTAATGATAACGAAGAAGATGAAATTGCGAATATTAGTTTTTCGATAATTAACAATTTTGCCACTATGACAGTTTCTTCACATATAAATGGTCTTCGAGTGGCAGCTAAAGTTATTTCAACTCAGAAAATTAGGGTCGCTCAATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)