Protein

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Genbank accession
ALA47866.1 [GenBank]
Protein name
putative E3 ubiquitin-protein ligase RNF123-like protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MDKYVPIITSQANASEYGGIDNFTVYSSGNYNKSTYPREILNRDNQVGWGSKTGDRLAWVRVLFPHVYAPRKFTMSTPIDVVMTKRTPTKFKIYGIRENYRNVHEAYQLRADTSITVEPDWAGADLLLDVNEGEGFWSPNQTKEWIINKSNKKYIGFYVYMYGKEEAWTGTMEYFIGEVQMYTYINDEKDVALIKRSVDGKYISIQKNRLHANLFSVRDLHEERERFYTFKSQRNIRSPFRVYLNGAENFYIFSETAYTKGKWYYEIRVSSGDSNYGQATYHMLGWHSKSDIENVVIPYEGDGVYLFCVNGNLYGAIERKVDYQYTKNTSMVDRIGIAIDLDNDYFEVYYDGASQGKVKMRSMGKPLVPVVGCGSSSVGEVTLVDNPKYLPKGYKNIVRKRDYEDIIVRFEDAPTVDDYKKYGVKEGESIEFDKPYNKLRVFTEATINTANGKIHSFKIVPSAETINKVRIEV
Physico‐chemical
properties
protein length:473 AA
molecular weight: 54680,99280 Da
isoelectric point:8,08757
aromaticity:0,13953
hydropathy:-0,56490

Domains

Domains [InterPro]
DC_1713
STR
130–395
DC_1713
IPR001870
STR
183–390
IPR001870
IPR043136
STR
241–386
IPR043136
IPR013320
STR
251–394
IPR013320
ALA47866.1
1 473
Architecture
STR
STR 130-395 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALA47866.1
1 473
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,0662
Central domain 19 249 232 0,5893
C-terminal 250 473 223 0,4256
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-249
C-terminal
250-473

Taxonomy

  Name Taxonomy ID Lineage
Phage Brevibacillus phage Sundance
[NCBI] 		1691958 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Brevibacillus laterosporus
[NCBI] 		1465 Bacteria > Firmicutes > Bacilli > Bacillales > Paenibacillaceae > Brevibacillus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALA47866.1 [NCBI]
Genbank nucleotide accession
KT151959 [NCBI]
CDS location
range 54034 -> 55455
strand +
CDS
ATGGACAAATATGTTCCTATTATAACTAGTCAAGCTAATGCTTCGGAGTATGGAGGTATTGATAACTTTACTGTTTACTCTTCAGGAAATTACAATAAAAGCACTTACCCTAGAGAGATACTTAATCGAGATAATCAAGTTGGTTGGGGGAGCAAAACAGGTGATAGACTTGCATGGGTTAGAGTTTTATTTCCACATGTCTACGCTCCAAGAAAGTTTACTATGTCTACTCCAATTGATGTAGTAATGACAAAGCGAACACCAACCAAATTTAAAATATATGGTATTCGTGAGAATTATCGAAACGTTCATGAGGCATATCAATTGAGAGCAGATACTTCAATTACTGTCGAACCTGATTGGGCTGGTGCAGACTTGCTTCTTGATGTGAATGAGGGGGAAGGATTTTGGAGTCCAAACCAAACTAAAGAATGGATAATCAATAAAAGCAATAAAAAGTACATCGGCTTCTATGTTTACATGTATGGGAAAGAAGAAGCTTGGACAGGTACTATGGAGTACTTCATTGGAGAAGTTCAGATGTACACATATATTAATGATGAAAAGGATGTTGCGCTGATTAAAAGAAGTGTGGATGGCAAGTATATCTCTATTCAGAAGAACAGGCTTCATGCAAATCTATTTTCTGTAAGAGATTTGCATGAAGAAAGAGAAAGGTTTTACACTTTTAAATCACAAAGAAATATACGTTCTCCCTTTAGGGTGTATTTGAATGGAGCAGAAAATTTCTATATATTTAGCGAGACAGCTTACACGAAAGGAAAGTGGTACTATGAAATAAGAGTGTCTTCGGGAGATTCGAATTATGGGCAAGCCACATACCATATGCTTGGATGGCACAGCAAAAGCGATATTGAGAACGTTGTGATTCCATATGAAGGCGATGGAGTTTATTTGTTTTGCGTAAATGGTAATTTATATGGAGCAATTGAACGAAAAGTAGATTATCAATATACCAAAAATACAAGTATGGTTGATAGAATTGGAATTGCTATAGATTTAGATAATGATTATTTTGAAGTGTATTATGATGGTGCTTCACAAGGGAAAGTTAAAATGCGTTCTATGGGGAAACCTCTTGTTCCAGTTGTTGGATGTGGTTCAAGTAGTGTAGGTGAGGTTACTCTTGTTGACAATCCAAAATACCTACCAAAAGGATATAAAAACATTGTGAGAAAGCGAGATTACGAAGATATTATTGTTAGATTTGAAGATGCCCCAACTGTTGATGATTATAAGAAGTATGGCGTAAAAGAAGGGGAGTCAATAGAATTTGACAAGCCTTATAACAAATTGAGGGTGTTTACAGAAGCTACGATAAATACAGCTAATGGGAAGATTCATTCGTTTAAAATTGTTCCTAGCGCTGAAACAATTAATAAAGTTAGGATTGAGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
390db127c5ea50b3ca05be5fde69a93cced62ce9024e44b9ce7b245012c14b91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6381
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50