Protein
View in Explore- Genbank accession
- ALA47866.1 [GenBank]
- Protein name
- putative E3 ubiquitin-protein ligase RNF123-like protein
- RBP type
-
TSP
- Protein sequence
-
MDKYVPIITSQANASEYGGIDNFTVYSSGNYNKSTYPREILNRDNQVGWGSKTGDRLAWVRVLFPHVYAPRKFTMSTPIDVVMTKRTPTKFKIYGIRENYRNVHEAYQLRADTSITVEPDWAGADLLLDVNEGEGFWSPNQTKEWIINKSNKKYIGFYVYMYGKEEAWTGTMEYFIGEVQMYTYINDEKDVALIKRSVDGKYISIQKNRLHANLFSVRDLHEERERFYTFKSQRNIRSPFRVYLNGAENFYIFSETAYTKGKWYYEIRVSSGDSNYGQATYHMLGWHSKSDIENVVIPYEGDGVYLFCVNGNLYGAIERKVDYQYTKNTSMVDRIGIAIDLDNDYFEVYYDGASQGKVKMRSMGKPLVPVVGCGSSSVGEVTLVDNPKYLPKGYKNIVRKRDYEDIIVRFEDAPTVDDYKKYGVKEGESIEFDKPYNKLRVFTEATINTANGKIHSFKIVPSAETINKVRIEV
- Physico‐chemical
properties -
protein length: 473 AA molecular weight: 54680,99280 Da isoelectric point: 8,08757 aromaticity: 0,13953 hydropathy: -0,56490
Domains
Domain architecture
ALA47866.1
1
473 aa
STR 183–394 ·
ATT Attachment Domain
STR Structural Domain
RBD Receptor-Binding Domain
CBM Carbohydrate-Binding Module
LEC Lectin-like Domain
ENZ Enzymatic Domain
CHP Intramolecular Chaperone
LNK Linker/Spacer Domain
TAS Tail-Associated Structural
TTP Tail Tubular Protein
UNK Uncharacterized Domain
Unmapped
Proteins with similar domain architecture
Tail Spike Domain Segmentation
Segmented into three structural domains: N-terminal, central, and C-terminal.
Domain layout
ALA47866.1
1
473 aa
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 18 | 18 | 0,0662 |
| Central domain | 19 | 249 | 232 | 0,5893 |
| C-terminal | 250 | 473 | 223 | 0,4256 |
Note: Constraints were applied during segmentation.
Fixed 45 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain
Fixed 45 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain
N-terminal
Central domain
C-terminal
View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.
Taxonomy
Coding sequence (CDS)
Genbank protein accession
ALA47866.1
[NCBI]
Genbank nucleotide accession
KT151959
[NCBI]
CDS location
range 54034 -> 55455
strand +
strand +
CDS
ATGGACAAATATGTTCCTATTATAACTAGTCAAGCTAATGCTTCGGAGTATGGAGGTATTGATAACTTTACTGTTTACTCTTCAGGAAATTACAATAAAAGCACTTACCCTAGAGAGATACTTAATCGAGATAATCAAGTTGGTTGGGGGAGCAAAACAGGTGATAGACTTGCATGGGTTAGAGTTTTATTTCCACATGTCTACGCTCCAAGAAAGTTTACTATGTCTACTCCAATTGATGTAGTAATGACAAAGCGAACACCAACCAAATTTAAAATATATGGTATTCGTGAGAATTATCGAAACGTTCATGAGGCATATCAATTGAGAGCAGATACTTCAATTACTGTCGAACCTGATTGGGCTGGTGCAGACTTGCTTCTTGATGTGAATGAGGGGGAAGGATTTTGGAGTCCAAACCAAACTAAAGAATGGATAATCAATAAAAGCAATAAAAAGTACATCGGCTTCTATGTTTACATGTATGGGAAAGAAGAAGCTTGGACAGGTACTATGGAGTACTTCATTGGAGAAGTTCAGATGTACACATATATTAATGATGAAAAGGATGTTGCGCTGATTAAAAGAAGTGTGGATGGCAAGTATATCTCTATTCAGAAGAACAGGCTTCATGCAAATCTATTTTCTGTAAGAGATTTGCATGAAGAAAGAGAAAGGTTTTACACTTTTAAATCACAAAGAAATATACGTTCTCCCTTTAGGGTGTATTTGAATGGAGCAGAAAATTTCTATATATTTAGCGAGACAGCTTACACGAAAGGAAAGTGGTACTATGAAATAAGAGTGTCTTCGGGAGATTCGAATTATGGGCAAGCCACATACCATATGCTTGGATGGCACAGCAAAAGCGATATTGAGAACGTTGTGATTCCATATGAAGGCGATGGAGTTTATTTGTTTTGCGTAAATGGTAATTTATATGGAGCAATTGAACGAAAAGTAGATTATCAATATACCAAAAATACAAGTATGGTTGATAGAATTGGAATTGCTATAGATTTAGATAATGATTATTTTGAAGTGTATTATGATGGTGCTTCACAAGGGAAAGTTAAAATGCGTTCTATGGGGAAACCTCTTGTTCCAGTTGTTGGATGTGGTTCAAGTAGTGTAGGTGAGGTTACTCTTGTTGACAATCCAAAATACCTACCAAAAGGATATAAAAACATTGTGAGAAAGCGAGATTACGAAGATATTATTGTTAGATTTGAAGATGCCCCAACTGTTGATGATTATAAGAAGTATGGCGTAAAAGAAGGGGAGTCAATAGAATTTGACAAGCCTTATAACAAATTGAGGGTGTTTACAGAAGCTACGATAAATACAGCTAATGGGAAGATTCATTCGTTTAAAATTGTTCCTAGCGCTGAAACAATTAATAAAGTTAGGATTGAGGTGTAA