Protein

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Genbank accession
QQM15851.1 [GenBank]
Protein name
baseplate hub protein
RBP type
TF
Evidence RBPdetect2
Probability 0,50
Protein sequence
MTIDLRAIRVGIEVSGRMHYYNATDGMRIKASGTKFANPTQNECTVTISNLKRETRDFLLTETSPYNKNRKPKRLVVEVGRVSTGLFRIYVGDITSAEPSSPPDVDIVLKSKTGNASSGDVVSKSAQALSKLSQIAAGIASDVGATLDFQALDKLIANYTYTGGALGQINRLAEAGGVRAFLDDDRLIVQDFGKATAGRVKVLNLNSGLVGIPKANDKGVDVTYLIDGESVLGGKLILESKFNRALNGSYKVDQLKFDVASHEDPFFYTALCSRL
Physico‐chemical
properties
protein length:275 AA
molecular weight: 29644,37250 Da
isoelectric point:9,06550
aromaticity:0,06909
hydropathy:-0,15491

Domains

Domains [InterPro]
IPR054496
8–272
IPR054496
QQM15851.1
1 275
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage BAPh-1
[NCBI] 		2801360 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQM15851.1 [NCBI]
Genbank nucleotide accession
MW168444 [NCBI]
CDS location
range 14627 -> 15454
strand +
CDS
ATGACGATTGATCTCCGGGCAATCCGTGTCGGGATCGAGGTTTCCGGCCGGATGCACTATTACAACGCCACGGATGGGATGAGGATCAAGGCGAGCGGCACCAAGTTCGCCAACCCCACCCAAAACGAATGCACGGTCACGATCTCCAACCTCAAGCGGGAGACGCGGGACTTTCTCCTGACAGAAACGAGTCCGTACAACAAAAACCGCAAGCCCAAGCGGCTTGTGGTGGAGGTGGGCCGGGTATCGACCGGATTGTTTAGGATCTACGTCGGTGACATTACCAGCGCGGAGCCGAGCAGCCCGCCAGACGTGGACATTGTCCTCAAGTCAAAGACGGGCAATGCGTCAAGTGGCGATGTAGTTTCAAAGAGCGCTCAGGCGCTTTCTAAGTTGTCACAGATCGCGGCGGGCATCGCCTCGGATGTAGGTGCAACGTTGGACTTCCAGGCTCTAGACAAACTCATCGCGAACTACACCTATACGGGCGGGGCTCTTGGGCAGATCAACAGGCTGGCTGAAGCCGGTGGCGTTCGGGCGTTTCTGGATGACGACCGTCTGATCGTGCAGGATTTCGGCAAAGCGACGGCGGGCCGCGTCAAGGTGCTCAACCTGAATAGTGGCCTAGTCGGGATACCGAAGGCCAACGACAAGGGGGTCGATGTGACATACCTGATCGATGGCGAATCGGTGCTTGGCGGCAAGCTGATCCTAGAGAGCAAGTTCAACCGGGCGCTTAACGGCAGCTACAAGGTTGACCAACTCAAATTCGACGTGGCAAGCCACGAAGATCCATTTTTCTACACCGCGCTATGCAGCAGACTGTAA

Tertiary structure

PDB ID
c12b04549c9940b55ef36f58a8280e5a7c75dc522be4e67b30804885c1096826
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9274
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomes of Bordetella phages Churin,Y., Serian,D., Guetgemann,F., Mueller,A., Hammerl,J.A. and Kehrenberg,C. 2023-06-15 — GenBank