Phage RBP Database

Genbank accession

CAM0076180.1 [GenBank]

Protein name

tail protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,99

Seq2Symm

C3 confidence 0,999

C3	0,999
D3	0,002
C1	0,001

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTKQVKLRRGTAAEHDSFVGAMSELTASTDTQTLYLHNGVSKGKNLLATVIHGLVERSFKERFAARISPKDFGAVGDGVTDDVMALNAAALYTHSVQGILDMDDGYYYVSSTVFFGDIAVRASKPGETDPFFARKADGTNFVTGGTGADWTYYFNVSNGASVSWQTHMTSKKDGCAICSDIASPIVSCAKGERFDIEGLGIVGNHRLKGQNGLEDPLNTKYTGNGHDLRRIAITGCGQHGVALYNGWEVSEPYDIKSGSNNGYGIFTGVINGGAVDSATEYLTCTKWRLPNNRLGGVYFTHMRKALFMDDIGGNNSGQYDGASDNGKVDPLLGYDRNIPATREAMASLIRVNDCNLDSTGAKGFMFGVHFHNIWGEAAAKLVHVRAQNGGGVVRNLTINGITAVRLASMKDIPADDPTNGVCAYLDIKYLAEVEIENIYNQALYPLDVENVDTVEDNIRAIGWTPVTPAEKLFLNWKYEGALSAQSFIAEEPRVYEDFPVAVGAGFTTLSTTIPKDIQTWYGTHGSVPRVAKYRVSILWQTNNSELGTIFECSVWRRPGDGRFMMRTQVQGAVDAATQGEPTIVTDGTLSFKMAQYTVARVELMDGYGWLGNVPLYASTRNAKGSGNVPASPTNGNIRPLRITTEDLRGN

Physico‐chemical properties

protein length:	650 AA
molecular weight:	70501,25380 Da
isoelectric point:	5,77413
aromaticity:	0,09385
hydropathy:	-0,26123

Domain architecture

CAM0076180.1

1 650 aa

ATT 1–48 · STR 49–407 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.10.10.30
ATT

G3DSA:2.10.10.30 IPR012334

IPR041352
ATT

IPR041352 IPR011050

CAM0076180.1

1650 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0579
STR

DC_0579

CAM0076180.1

1650 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.10.10.30	ATT	G3DSA:2.10.10.30	1	48	Merged direct domain	G3DSA:2.10.10.30	N-terminal	Low	Positional only	20 proteins / 20 hits
IPR041352	ATT	DC_0533	5	41	InterPro cluster	Major tropism determinant, N-terminal domain	Central	Medium	Text match	295 proteins / 296 hits
IPR012334	STR	IPR012334	49	329	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	64	407	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

CAM0076180.1

1 650 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	82	82	0,9817
Central domain	83	471	390	0,9911
C-terminal	472	650	178	0,9842

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Vibrio phage K436 [NCBI] · taxon 3105698

Vibrio phage K436

Host No host information

Genbank protein accession

CAM0076180.1 [NCBI]

Genbank nucleotide accession

OZ196583 [NCBI]

CDS location

range 40527 -> 42479
strand +

CDS

ATGACCAAACAAGTAAAGCTGCGTCGTGGTACAGCAGCAGAGCATGACTCGTTCGTGGGTGCAATGTCTGAATTGACAGCATCCACAGACACGCAGACACTGTACCTACACAACGGGGTGTCCAAAGGCAAGAACTTACTAGCAACTGTAATCCACGGTCTTGTGGAGCGCTCCTTTAAAGAGCGCTTCGCAGCCCGCATAAGTCCGAAAGACTTCGGGGCAGTGGGTGACGGCGTAACCGATGATGTGATGGCGCTGAACGCCGCCGCTCTGTACACGCACAGCGTACAGGGTATCCTAGACATGGATGATGGGTACTACTATGTCTCCAGCACAGTCTTCTTTGGAGACATCGCAGTGCGTGCAAGCAAGCCAGGTGAGACAGACCCGTTCTTCGCACGTAAGGCAGACGGTACCAACTTTGTAACTGGAGGAACCGGAGCTGATTGGACATACTACTTCAACGTAAGTAACGGAGCTAGCGTGTCCTGGCAAACCCACATGACATCCAAGAAGGATGGGTGTGCTATATGTTCCGACATCGCGAGCCCTATCGTGAGTTGTGCTAAAGGAGAGCGCTTTGACATCGAGGGCCTAGGAATAGTAGGGAACCATCGCCTAAAAGGACAGAATGGTCTAGAAGACCCACTGAACACGAAGTACACTGGAAACGGTCACGACCTCCGTCGCATAGCAATCACAGGGTGTGGGCAACACGGTGTAGCACTGTACAACGGCTGGGAGGTATCTGAGCCCTACGACATCAAATCAGGGTCTAACAACGGCTATGGTATATTCACTGGTGTAATCAACGGTGGTGCTGTAGATTCGGCTACGGAGTACCTAACATGCACCAAGTGGAGACTACCTAACAACCGACTAGGCGGGGTGTACTTCACCCACATGCGTAAAGCACTCTTCATGGACGACATAGGAGGTAACAACAGCGGGCAGTACGACGGAGCTTCAGATAATGGCAAAGTAGACCCTCTCCTAGGGTACGACAGAAACATACCTGCGACCCGTGAGGCTATGGCCTCCCTGATACGAGTCAACGATTGTAACCTTGATAGCACGGGTGCCAAGGGTTTCATGTTTGGAGTACACTTCCATAACATCTGGGGAGAAGCAGCTGCGAAGCTAGTACACGTACGCGCACAGAACGGCGGAGGGGTAGTACGTAACCTGACCATAAACGGTATAACAGCAGTACGTCTAGCAAGCATGAAAGACATCCCTGCAGACGACCCTACAAACGGTGTGTGCGCCTACCTAGACATCAAGTACCTAGCAGAAGTTGAGATTGAGAACATCTACAACCAAGCGCTGTATCCACTAGATGTCGAAAACGTAGACACCGTGGAAGACAACATACGCGCTATTGGCTGGACACCCGTAACACCCGCTGAGAAACTGTTCCTCAATTGGAAATACGAGGGTGCCTTGAGTGCACAGTCGTTCATAGCTGAGGAACCGCGGGTGTACGAAGACTTCCCAGTAGCTGTAGGGGCAGGCTTCACCACATTGTCTACCACGATACCTAAGGACATCCAGACATGGTACGGCACACACGGGTCAGTACCTCGTGTAGCCAAGTACCGTGTGTCTATCCTGTGGCAGACGAACAACTCAGAGCTAGGCACAATATTTGAGTGTTCCGTATGGCGCCGTCCTGGAGACGGGCGGTTCATGATGCGCACGCAAGTCCAAGGCGCAGTGGATGCGGCAACCCAAGGAGAACCTACTATAGTTACAGACGGTACGCTATCATTCAAGATGGCGCAGTACACTGTAGCGAGGGTGGAACTGATGGATGGTTACGGCTGGTTAGGTAACGTGCCACTATACGCGTCGACAAGAAACGCCAAAGGTTCGGGGAACGTTCCAGCATCCCCTACAAATGGCAACATCCGCCCTCTACGTATAACAACTGAAGACCTACGAGGTAACTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)