Phage RBP Database

Genbank accession

CAM0076180.1 [GenBank]

Protein name

tail protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,99

Protein sequence

MTKQVKLRRGTAAEHDSFVGAMSELTASTDTQTLYLHNGVSKGKNLLATVIHGLVERSFKERFAARISPKDFGAVGDGVTDDVMALNAAALYTHSVQGILDMDDGYYYVSSTVFFGDIAVRASKPGETDPFFARKADGTNFVTGGTGADWTYYFNVSNGASVSWQTHMTSKKDGCAICSDIASPIVSCAKGERFDIEGLGIVGNHRLKGQNGLEDPLNTKYTGNGHDLRRIAITGCGQHGVALYNGWEVSEPYDIKSGSNNGYGIFTGVINGGAVDSATEYLTCTKWRLPNNRLGGVYFTHMRKALFMDDIGGNNSGQYDGASDNGKVDPLLGYDRNIPATREAMASLIRVNDCNLDSTGAKGFMFGVHFHNIWGEAAAKLVHVRAQNGGGVVRNLTINGITAVRLASMKDIPADDPTNGVCAYLDIKYLAEVEIENIYNQALYPLDVENVDTVEDNIRAIGWTPVTPAEKLFLNWKYEGALSAQSFIAEEPRVYEDFPVAVGAGFTTLSTTIPKDIQTWYGTHGSVPRVAKYRVSILWQTNNSELGTIFECSVWRRPGDGRFMMRTQVQGAVDAATQGEPTIVTDGTLSFKMAQYTVARVELMDGYGWLGNVPLYASTRNAKGSGNVPASPTNGNIRPLRITTEDLRGN

Physico‐chemical properties

protein length:	650 AA
molecular weight:	70501,25380 Da
isoelectric point:	5,77413
aromaticity:	0,09385
hydropathy:	-0,26123

Domain architecture

CAM0076180.1

1 650 aa

ATT 1–48 · STR 49–407 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.10.10.30
ATT

G3DSA:2.10.10.30 IPR012334

IPR041352
ATT

IPR041352 IPR011050

CAM0076180.1

1650 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0579
STR

DC_0579

CAM0076180.1

1650 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.10.10.30	ATT	G3DSA:2.10.10.30	1	48	Merged direct domain	G3DSA:2.10.10.30	N-terminal	Low	Positional only	20 proteins / 20 hits
IPR041352	ATT	DC_0533	5	41	InterPro cluster	Major tropism determinant, N-terminal domain	Central	Medium	Text match	295 proteins / 296 hits
IPR012334	STR	IPR012334	49	329	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	64	407	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

CAM0076180.1

1 650 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	82	82	0,9817
Central domain	83	471	390	0,9911
C-terminal	472	650	178	0,9842

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Vibrio phage K436 [NCBI] · taxon 3105698

Viruses

Host No host information

Genbank protein accession

CAM0076180.1 [NCBI]

Genbank nucleotide accession

OZ196583 [NCBI]

CDS location

range 40527 -> 42479
strand +

CDS

ATGACCAAACAAGTAAAGCTGCGTCGTGGTACAGCAGCAGAGCATGACTCGTTCGTGGGTGCAATGTCTGAATTGACAGCATCCACAGACACGCAGACACTGTACCTACACAACGGGGTGTCCAAAGGCAAGAACTTACTAGCAACTGTAATCCACGGTCTTGTGGAGCGCTCCTTTAAAGAGCGCTTCGCAGCCCGCATAAGTCCGAAAGACTTCGGGGCAGTGGGTGACGGCGTAACCGATGATGTGATGGCGCTGAACGCCGCCGCTCTGTACACGCACAGCGTACAGGGTATCCTAGACATGGATGATGGGTACTACTATGTCTCCAGCACAGTCTTCTTTGGAGACATCGCAGTGCGTGCAAGCAAGCCAGGTGAGACAGACCCGTTCTTCGCACGTAAGGCAGACGGTACCAACTTTGTAACTGGAGGAACCGGAGCTGATTGGACATACTACTTCAACGTAAGTAACGGAGCTAGCGTGTCCTGGCAAACCCACATGACATCCAAGAAGGATGGGTGTGCTATATGTTCCGACATCGCGAGCCCTATCGTGAGTTGTGCTAAAGGAGAGCGCTTTGACATCGAGGGCCTAGGAATAGTAGGGAACCATCGCCTAAAAGGACAGAATGGTCTAGAAGACCCACTGAACACGAAGTACACTGGAAACGGTCACGACCTCCGTCGCATAGCAATCACAGGGTGTGGGCAACACGGTGTAGCACTGTACAACGGCTGGGAGGTATCTGAGCCCTACGACATCAAATCAGGGTCTAACAACGGCTATGGTATATTCACTGGTGTAATCAACGGTGGTGCTGTAGATTCGGCTACGGAGTACCTAACATGCACCAAGTGGAGACTACCTAACAACCGACTAGGCGGGGTGTACTTCACCCACATGCGTAAAGCACTCTTCATGGACGACATAGGAGGTAACAACAGCGGGCAGTACGACGGAGCTTCAGATAATGGCAAAGTAGACCCTCTCCTAGGGTACGACAGAAACATACCTGCGACCCGTGAGGCTATGGCCTCCCTGATACGAGTCAACGATTGTAACCTTGATAGCACGGGTGCCAAGGGTTTCATGTTTGGAGTACACTTCCATAACATCTGGGGAGAAGCAGCTGCGAAGCTAGTACACGTACGCGCACAGAACGGCGGAGGGGTAGTACGTAACCTGACCATAAACGGTATAACAGCAGTACGTCTAGCAAGCATGAAAGACATCCCTGCAGACGACCCTACAAACGGTGTGTGCGCCTACCTAGACATCAAGTACCTAGCAGAAGTTGAGATTGAGAACATCTACAACCAAGCGCTGTATCCACTAGATGTCGAAAACGTAGACACCGTGGAAGACAACATACGCGCTATTGGCTGGACACCCGTAACACCCGCTGAGAAACTGTTCCTCAATTGGAAATACGAGGGTGCCTTGAGTGCACAGTCGTTCATAGCTGAGGAACCGCGGGTGTACGAAGACTTCCCAGTAGCTGTAGGGGCAGGCTTCACCACATTGTCTACCACGATACCTAAGGACATCCAGACATGGTACGGCACACACGGGTCAGTACCTCGTGTAGCCAAGTACCGTGTGTCTATCCTGTGGCAGACGAACAACTCAGAGCTAGGCACAATATTTGAGTGTTCCGTATGGCGCCGTCCTGGAGACGGGCGGTTCATGATGCGCACGCAAGTCCAAGGCGCAGTGGATGCGGCAACCCAAGGAGAACCTACTATAGTTACAGACGGTACGCTATCATTCAAGATGGCGCAGTACACTGTAGCGAGGGTGGAACTGATGGATGGTTACGGCTGGTTAGGTAACGTGCCACTATACGCGTCGACAAGAAACGCCAAAGGTTCGGGGAACGTTCCAGCATCCCCTACAAATGGCAACATCCGCCCTCTACGTATAACAACTGAAGACCTACGAGGTAACTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)