Protein

View in Explore
Genbank accession
BFJ60528.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSNILDSAKKYIEETEEINLAHLVSLELPGSSGVFIYLTDYFRDITYKGQVYKSGVIKRVGDVKQTKELTIYRVPVQVSGAIDEEIDRVLNSKSFLNRKLKIDRVFLDEAGEIIQIYADGSTVTYFEGVIVSSALDESNTNKGKGRSVITWNCASKLYALDAINGRLTDDASHRGLINVNGVMQPSSSAKKPEYQLDKGFFHANKSIKLLAEYQTKEKRYRLKKRRAGGFRGLMGQKHYDMEEYWANVVKEVDMDINLTAKYLPVVYGVQKVAGIPIFFDTDINNPEEIWAVYAFCEGEIDGFLDIFFGDNPMICISENDQSKRACVGMKRNNGDTIGALAPASGRTVPSKHGEHYIYDDGNGPIDFWTFHGSLTQDAAKVLVDKAAAGSFKLQNDGNYGAEYWDDSFKLTDTAYLVVKFELNENRTSIPEVSAEVQGKKIPVYHEDGTVTADRTSLNLAWQTLDYLRSTTYGAGLTLAEIDLTSVRECAKYMDAIDTSYDPAWVPYWRYLGWEDYTAENRQILQGSAILSTSDTVFKNVQSLIAQYDASLNIVSGKYTLTMEADKPVVYDINEGDIIDGSIKVSDNSMENKYNSIQASIIDPASAWGSNTITFFNKDYKVEDNGKDRKANVTFPFITNYYTARTRAEYYLRKSRYNRTVSFSLPFTFLWLYPNANITLSVKRYGWDKKHFLIQDMTWKANGHIMVTAREYAPDVFINSAQTDNSDDQIPDVVVSVLPPRDLQYDPKLGEPEVGLNGTLSWLPSLTKRVAYYTIKYTGLVDLITVPVSGTAPLNSRVTMPLYNLAEGEYTFEVRAVSPDGDTSLPAKLAVNVNPSAILPKIENLRLINRTDTSSKVFIGKDVELMWDELLEGASVSGFRYRLRFLDGDTGEVLRDTTTTSSSFIYTYDMNKEDYKRTHGTLGICRNIIIYIRGEADNNITSIDWTIL
Physico‐chemical
properties
protein length:947 AA
molecular weight: 106588,81210 Da
isoelectric point:5,20625
aromaticity:0,10982
hydropathy:-0,34129

Domains

Domains [InterPro]
DC_0187
STR
241–941
DC_0187
IPR032876
ATT
539–681
IPR032876
BFJ60528.1
1 947
Architecture
STR
ATT
STR
STR 241-538 | ATT 539-681 | STR 682-941 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BFJ60528.1
1 947
Domain Start End Length (AA) Confidence
N-terminal 1 305 305 0,8359
Central domain 306 522 218 0,5555
C-terminal 523 947 424 0,0505
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-305
Central
306-522
C-terminal
523-947

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VF16
[NCBI] 		3137795 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BFJ60528.1 [NCBI]
Genbank nucleotide accession
LC811684.1 [NCBI]
CDS location
range 93978 -> 96821
strand -
CDS
ATGAGTAATATATTAGACTCAGCCAAGAAGTATATAGAAGAAACAGAAGAAATAAATTTAGCACACCTAGTCTCCCTAGAGCTGCCTGGCAGTTCAGGTGTCTTTATATACTTAACAGATTATTTTAGAGATATTACTTATAAAGGTCAAGTATATAAATCGGGAGTAATCAAAAGAGTAGGCGATGTAAAACAGACTAAAGAGCTAACAATCTATAGAGTCCCAGTACAAGTAAGTGGAGCTATAGATGAAGAAATAGATAGAGTGCTAAATTCTAAGAGCTTTTTGAATAGAAAACTAAAAATAGATAGAGTATTCTTAGATGAGGCTGGTGAGATTATTCAAATATATGCGGATGGCAGTACTGTTACCTACTTTGAAGGGGTTATAGTAAGTAGTGCGTTAGACGAGTCAAATACCAATAAAGGTAAAGGACGTTCTGTAATTACATGGAACTGTGCTAGTAAGCTATACGCACTTGATGCCATTAACGGCAGGCTCACGGATGACGCATCTCACCGAGGATTAATTAATGTAAACGGGGTTATGCAACCCTCAAGCAGTGCCAAAAAGCCAGAGTATCAATTAGATAAGGGATTCTTCCATGCTAACAAGTCCATTAAGCTACTAGCTGAGTACCAGACAAAAGAGAAACGTTATCGTCTAAAGAAACGACGTGCTGGAGGCTTCCGTGGTCTTATGGGGCAAAAACACTATGACATGGAAGAATACTGGGCAAATGTAGTAAAAGAAGTAGACATGGATATAAACCTTACTGCTAAATATTTGCCTGTAGTATATGGGGTACAGAAGGTTGCCGGTATACCTATTTTCTTTGATACGGATATTAATAATCCAGAAGAAATATGGGCTGTATATGCGTTCTGTGAAGGCGAGATAGATGGATTTCTAGATATATTTTTTGGGGATAACCCTATGATTTGTATATCTGAAAATGACCAATCAAAACGAGCTTGTGTAGGAATGAAACGTAATAACGGTGACACCATAGGAGCTCTAGCCCCTGCTAGTGGAAGAACCGTACCTAGTAAGCATGGGGAGCACTATATCTATGATGATGGTAACGGGCCTATAGACTTCTGGACGTTCCACGGGTCACTAACCCAGGATGCTGCAAAGGTACTTGTGGACAAAGCGGCAGCAGGGTCGTTCAAGTTACAAAACGATGGTAACTACGGGGCAGAGTACTGGGATGACTCATTTAAGCTAACGGACACTGCTTACCTAGTTGTTAAGTTCGAACTAAATGAAAATAGAACTTCAATACCTGAAGTATCGGCAGAGGTACAGGGCAAGAAGATACCAGTATACCATGAAGACGGGACAGTAACTGCGGATAGAACCTCCTTGAATCTAGCGTGGCAAACACTAGACTATTTACGTAGTACAACTTACGGGGCAGGACTTACTTTAGCTGAGATTGACTTGACCTCTGTAAGAGAGTGCGCTAAATACATGGACGCGATAGATACGTCATACGATCCTGCTTGGGTTCCATACTGGAGATACCTAGGTTGGGAGGATTATACAGCAGAGAATAGACAAATACTGCAAGGATCCGCTATCCTATCTACTAGTGATACTGTGTTTAAGAATGTGCAATCTTTGATTGCTCAATACGATGCTTCTTTGAATATAGTTAGTGGTAAGTATACTCTAACTATGGAGGCAGATAAGCCAGTAGTATATGATATAAATGAAGGAGATATAATTGATGGTAGTATCAAGGTCTCCGACAACTCTATGGAGAATAAATATAATTCTATACAGGCAAGCATAATCGATCCTGCTAGTGCATGGGGTAGTAATACTATTACCTTCTTCAATAAAGATTATAAGGTAGAGGATAATGGGAAGGATAGAAAAGCAAACGTAACCTTCCCTTTCATAACTAACTACTATACTGCCCGTACAAGAGCCGAGTATTACTTAAGGAAGTCTAGATATAATAGAACTGTTTCATTTAGTCTACCGTTTACTTTCTTATGGCTATACCCAAATGCTAATATAACTCTAAGTGTAAAGAGATATGGGTGGGACAAGAAGCATTTCTTAATCCAAGATATGACTTGGAAAGCAAATGGGCACATTATGGTAACTGCTAGGGAATACGCTCCAGATGTGTTTATAAACTCTGCGCAAACAGATAATAGTGACGATCAGATACCTGATGTAGTAGTAAGTGTATTACCTCCACGAGACCTACAGTATGACCCTAAGTTAGGTGAGCCCGAGGTAGGGTTAAACGGTACTCTTTCATGGTTGCCAAGCTTAACTAAAAGAGTGGCATACTATACTATTAAATATACAGGGCTAGTGGACTTAATTACTGTACCTGTATCGGGTACGGCTCCTCTGAACTCAAGAGTTACTATGCCGCTTTATAACTTAGCAGAAGGGGAGTATACCTTCGAGGTTAGAGCAGTATCCCCAGATGGTGACACTAGCTTACCAGCTAAATTGGCAGTTAATGTTAACCCTAGCGCTATACTACCTAAAATCGAGAATCTTAGACTTATAAATAGAACGGATACATCTTCGAAAGTATTTATAGGTAAAGATGTAGAGCTTATGTGGGACGAGCTACTGGAAGGTGCTTCGGTCTCAGGCTTTAGATACAGACTTAGATTTTTAGATGGCGATACTGGTGAGGTATTACGAGACACCACTACTACCTCTTCTTCTTTCATCTATACTTATGATATGAATAAGGAAGATTATAAACGAACACACGGAACTCTCGGTATATGTAGAAATATTATAATATATATTCGAGGAGAAGCTGATAACAATATAACTTCAATTGATTGGACGATACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
544d935024ff738be3ea098dd7f8d01a94b2f3cec2c6a3871f07640d413d8c94
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8142
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Combination of a novel bacteriophage and D-serine effectively controls Vibrio parahaemolyticus growth in seafood Miura,D., Yamaki,S., Tabuchi,I., Kawai,Y. and Yamazaki,K. 2024 — GenBank