Protein

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Genbank accession
YAF80581.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,71
Protein sequence
MATGVDPELQAQLDKLTTAVQLIHDFGMSDDPNIPNPEGGVIRTLEGINAAINEAIPNFENANEAAIQARAARDAAIAAKEAAETAAEQATVSSTSAIYEYGNVASAATVTIPAASKTIVSLTLNQPNTVINIGGVSDPSTVARQITIAIKQGTGSNKVTSWDPRIKWANNRKPVLSFLVGYTDVVTLLTFDSGATWMGFFNGGWIK
Physico‐chemical
properties
protein length:207 AA
molecular weight: 21760,17850 Da
isoelectric point:4,75000
aromaticity:0,06280
hydropathy:-0,00821

Taxonomy

Phage
Salmonella phage SAEN098P03 [NCBI] · taxon 3459910
Viruses
Host
Salmonella enterica [NCBI] · taxon 28901
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YAF80581.1 [NCBI]
Genbank nucleotide accession
PX104386.1 [NCBI]
CDS location
range 6807 -> 7430
strand +
CDS
ATGGCAACTGGAGTAGACCCGGAACTGCAAGCGCAGCTGGATAAGCTAACAACTGCTGTCCAGCTCATTCATGACTTCGGTATGTCAGACGACCCAAACATCCCTAACCCGGAAGGCGGTGTCATACGCACACTCGAAGGCATTAACGCTGCAATCAACGAAGCTATACCAAACTTTGAAAATGCTAACGAAGCTGCTATACAGGCACGTGCCGCTCGTGATGCGGCTATTGCAGCCAAAGAAGCTGCAGAAACCGCAGCTGAACAGGCCACAGTATCTTCGACGTCAGCAATCTATGAGTACGGCAACGTTGCAAGTGCAGCTACTGTAACTATACCTGCTGCATCTAAAACAATTGTCAGTCTTACTCTTAACCAGCCAAACACCGTAATTAATATCGGTGGTGTATCTGACCCGTCTACTGTTGCGCGTCAGATTACTATTGCTATTAAGCAAGGCACTGGTTCTAACAAGGTGACTTCTTGGGATCCCAGAATAAAATGGGCCAACAACAGAAAGCCCGTTCTGTCATTCCTTGTGGGTTACACAGATGTTGTTACGTTGCTGACCTTTGACTCAGGCGCAACTTGGATGGGTTTCTTTAACGGTGGATGGATTAAATAA

Genome Context

Tertiary structure

YAF80581.1
ColabFold structure
Source ColabFold
pLDDT 81.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A machine learning approach to predict strain-specific phage-host interactions Camejo,P.Y., Leon,L.E., Rojas,F., Ossa,A., Hurtado,R., Tichy,D., Pieringer,C., Pino,M., Mora-Uribe,P., Ulloa,S., Norambuena,R., Tobar-Calfucoy,E., Aguilera,M., Rojas-Martinez,V., Cifuentes,O., Sabag,A., Cifuentes,N., San Martin,D., Infante,C., Cifuentes,P. and Pieringer,H. — — GenBank