Protein

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Genbank accession
XOD31658.1 [GenBank]
Protein name
baseplate wedge protein
RBP type
TF
Evidence RBPdetect2
Probability 0,85
Seq2Symm
C2 confidence 0,305
C2 0,305
C1 0,224
C3 0,105
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MGFGSWKLFGKGQVLVGWNDDVTDPNFALNNNDLDSSGNPSHTAGGTVGTTSLTLENANLPATKTDERVLIEDENGSVIIGGCQYDPDETGHIYTKYREDYATTNSSHTPPTNISNIQPSITVYRWIRIA
Physico‐chemical
properties
protein length:130 AA
molecular weight: 14149,26640 Da
isoelectric point:4,55482
aromaticity:0,08462
hydropathy:-0,55308

Taxonomy

Phage
Shigella phage sb1 [NCBI] · taxon 3387546
Shigella phage sb1
Host
Shigella flexneri [NCBI] · taxon 623
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella flexneri

Coding sequence (CDS)

Genbank protein accession
XOD31658.1 [NCBI]
Genbank nucleotide accession
PQ666539 [NCBI]
CDS location
range 90735 -> 91127
strand +
CDS
ATGGGGTTTGGTTCGTGGAAATTATTTGGTAAAGGACAAGTGTTAGTAGGATGGAATGATGATGTTACGGATCCAAACTTTGCTTTAAACAATAATGATTTAGATTCTAGCGGAAATCCTTCACATACTGCCGGTGGAACGGTTGGAACAACATCATTAACGCTTGAAAATGCAAATCTTCCTGCGACTAAAACTGACGAAAGAGTTTTAATTGAAGATGAAAACGGATCAGTTATTATTGGAGGTTGTCAATATGACCCAGATGAAACTGGTCATATATATACAAAATATCGTGAAGACTATGCAACAACAAACTCTTCACATACTCCTCCTACTAATATTAGTAATATTCAACCGTCTATTACTGTATACCGTTGGATAAGGATTGCATAA

Genome Context

Tertiary structure

XOD31658.1
ESMFold2 structure
Source ESMFold2
pLDDT 63.6
Oligomeric state monomer
Download structure