Protein
View in Explore- Genbank accession
- QCW18655.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MIPFARILDYGNTLLDAKIVQFCGLNYFALYIDSIGNLFALGDNSQGQLGTGDSAPLSEWRLIAGNIKKVVCATDMSVIIQGNDGQYYISGNRTCLGLNSNVYSFTKLPFTIPSDAYNITATLNNMAYLIPNSTDRTYGDLYMVGRNSTYSLSNKVALNGMLSVPTLMVSRVKDVQLYNGITAYRKWFSAYDVICGFGNAPSMLGTSPTPNEVQVASAPRTSNISWSLMPSAVMSINQSWIYGAGLGTYYCMGNGSTAQIGITSLYSMVGANKFFNHPYSILTRYGTFFSVNNDLYCTGNNTSGQLGLGNKVTPQNKTIINLPDELVLNDIIGICANSTNTMIITRNTIWYSGSSFPSLSQDTTTFTKLSLGAEVDIKSIN
- Physico‐chemical
properties -
protein length: 381 AA molecular weight: 41394,56140 Da isoelectric point: 7,46486 aromaticity: 0,10761 hydropathy: 0,03701
Domains
Domains [InterPro]
DC_0433
ATT
1–138
ATT
1–138
IPR009091
STR
10–273
STR
10–273
IPR051553
Unmapped
16–352
Unmapped
16–352
IPR009091
STR
18–352
STR
18–352
IPR000408
STR
36–83
STR
36–83
1
381
Architecture
ATT 1-138 | STR 139-381
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
381
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 165 | 165 | 0,1684 |
| Central domain | 166 | 370 | 206 | 0,6074 |
| C-terminal | 371 | 381 | 10 | 0,4293 |
Note: Constraints were applied during segmentation.
Fixed 98 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 98 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-165
1-165
Central
166-370
166-370
C-terminal
371-381
371-381
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Salmonella phage 7t3 [NCBI] |
2575254 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Salmonella enterica subsp. enterica serovar Typhi [NCBI] |
90370 | Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QCW18655.1
[NCBI]
Genbank nucleotide accession
MK773491
[NCBI]
CDS location
range 58280 -> 59425
strand -
strand -
CDS
ATGATACCGTTTGCTAGGATATTGGATTATGGGAACACATTACTGGATGCAAAAATAGTTCAATTCTGTGGATTGAATTATTTTGCATTATATATAGATTCTATTGGTAATTTATTTGCATTAGGGGATAATAGTCAGGGTCAATTGGGTACTGGTGATTCTGCACCATTATCTGAATGGAGATTGATTGCAGGTAATATTAAAAAAGTGGTATGTGCTACTGATATGAGTGTGATCATTCAAGGAAATGATGGTCAGTACTATATATCTGGCAACCGCACATGTTTAGGGCTTAATAGTAATGTATATAGTTTTACCAAACTTCCCTTTACTATTCCTAGTGATGCTTATAACATTACAGCTACTTTAAACAACATGGCTTATTTAATACCGAATTCGACTGATCGCACATATGGTGATTTATATATGGTTGGTAGGAATAGTACTTATAGTTTAAGTAATAAGGTTGCCTTAAATGGAATGTTATCAGTACCTACTTTAATGGTTTCTAGGGTTAAAGATGTACAGCTTTATAATGGCATAACGGCTTATCGAAAATGGTTCAGTGCATATGATGTTATCTGTGGTTTTGGTAATGCACCATCGATGCTTGGAACATCACCTACGCCGAATGAAGTACAAGTTGCTTCTGCTCCTAGAACTTCTAACATTTCATGGAGTTTAATGCCATCGGCGGTTATGTCTATTAATCAAAGTTGGATATATGGAGCGGGATTAGGTACTTATTATTGCATGGGTAATGGAAGTACAGCCCAAATTGGTATTACGAGTTTGTATAGTATGGTTGGTGCTAATAAGTTTTTCAATCATCCATATTCTATATTAACACGTTATGGTACATTTTTTAGTGTGAATAATGATTTATATTGTACTGGAAATAATACAAGTGGACAATTGGGTTTAGGTAATAAGGTTACGCCCCAAAATAAGACAATTATTAATTTACCAGATGAGTTAGTACTTAATGATATAATTGGAATATGTGCTAATTCAACTAATACTATGATAATAACTAGAAATACAATTTGGTATAGTGGTTCTTCTTTTCCTTCCTTAAGTCAAGATACAACTACCTTTACTAAATTGTCATTGGGTGCAGAAGTTGATATTAAATCTATTAATTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
f4dddcbd7bc1d95f13ff511d039845eab3973dd8436d8b34ad53adf6535fd3c6
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50