Protein

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Genbank accession
YP_009832393.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,73
Seq2Symm
C3 confidence 0,954
C3 0,954
I 0,014
C2 0,010
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAQRANTGSKITARQIVAQGIKQLQGPGWQQTTIGTIGDSITDGSAGDNFTFPNPIDADGNLSSTNYDHGSNPAGGMNSWFHHFVNTVNLLAGYSEYHNRNICTGYNAARSGMGINSGWAYRNFDFGFFQNAAYGNKAPEVLLVSMGTNDVGQVFTKSDCEAYIDKLDALIAKANGYGCKVVLVSMTHFSAMAPVFYDAVMTCVQNNHPNVEFLNLADDLKLLANSSIGFYNELFREFDAIHPKTLAHQFLGGALARRMLPDRVFSIQNGDNVRSAQSGSVQAFMPTLDDITPFGIDVSANWLLPETLWPIYQTSSGTDGSDITIRHFVWVERVTQLYIVEPHVNYYESGAIPGASAKIMYPCLAGAARSRELELASNLKASFDGFLVTECDLLWPGLNVIDVKYSSVINAYAPILQFREPNWRGEFGPMRIKIPSGSANLYSNNTQTHFLQYMSFNASSPLDPLPDAGRGVRVSDWLITFAIKRASIGVAVAAWFHQFLGTSIAVFYKSATSIEVCRMTSGILKEVIADVTGNFSSDWHVQFAQASTGSIVNVIDSTGVETITAITGVSGGSIGIINLNGEAAELVVAGVSVELPRNGHIVI
Physico‐chemical
properties
protein length:603 AA
molecular weight: 65381,96080 Da
isoelectric point:5,44099
aromaticity:0,10448
hydropathy:0,01459

Taxonomy

Phage
Pectobacterium phage vB_PatP_CB4 [NCBI] · taxon 1958919
Uroviricota Caudoviricetes Schitoviridae Cbunavirus Cbunavirus CB4
Host
Pectobacterium atrosepticum [NCBI] · taxon 29471
Pseudomonadota Gammaproteobacteria Enterobacterales Pectobacteriaceae Pectobacterium Pectobacterium atrosepticum

Coding sequence (CDS)

Genbank protein accession
YP_009832393.1 [NCBI]
Genbank nucleotide accession
NC_048654 [NCBI]
CDS location
range 33816 -> 35627
strand -
CDS
ATGGCTCAGCGGGCTAACACTGGCTCAAAAATCACGGCTCGGCAGATTGTGGCTCAAGGCATCAAACAGCTGCAAGGGCCTGGGTGGCAACAGACGACAATCGGAACTATTGGGGATTCGATCACAGATGGCTCAGCGGGTGATAATTTCACGTTCCCGAACCCAATTGATGCTGACGGTAATTTGTCATCAACAAACTATGATCATGGCTCAAATCCGGCTGGCGGGATGAATTCTTGGTTTCATCATTTCGTAAACACAGTAAACCTGCTAGCTGGTTATTCTGAATATCACAATCGCAATATTTGTACCGGATATAATGCCGCGCGCTCAGGCATGGGAATTAATTCCGGCTGGGCGTACCGAAATTTTGATTTCGGTTTTTTTCAAAATGCGGCATATGGAAATAAAGCTCCTGAGGTATTGCTCGTGTCGATGGGAACCAATGACGTTGGCCAGGTGTTTACTAAGTCTGACTGTGAAGCATATATCGACAAATTAGACGCATTGATCGCGAAGGCTAACGGCTATGGCTGTAAAGTTGTTCTGGTGTCTATGACGCATTTTTCAGCAATGGCTCCAGTATTTTACGACGCTGTGATGACATGTGTTCAAAACAATCACCCGAACGTTGAATTTCTGAATTTGGCAGATGATTTGAAACTGCTGGCTAACTCATCAATTGGTTTTTACAACGAGTTATTCCGGGAATTTGATGCTATTCATCCGAAAACGCTGGCCCATCAATTCCTGGGGGGAGCGTTAGCTCGCCGCATGCTCCCTGATCGGGTTTTTAGTATTCAGAACGGCGATAACGTGCGCTCTGCCCAGTCAGGTTCTGTACAAGCGTTTATGCCAACGCTCGATGACATCACGCCTTTCGGCATTGATGTCTCTGCAAACTGGCTACTACCTGAAACACTATGGCCGATTTATCAAACCAGTTCAGGCACGGATGGTTCTGATATAACAATTCGACATTTTGTATGGGTAGAGCGAGTAACGCAGTTGTATATCGTTGAGCCTCACGTGAATTACTACGAATCGGGGGCCATACCAGGCGCATCAGCAAAAATTATGTATCCGTGCCTCGCAGGCGCGGCCAGAAGCAGAGAGTTAGAGTTAGCGTCAAATTTGAAAGCGTCATTTGATGGATTTCTCGTAACAGAGTGCGATCTGTTGTGGCCTGGACTCAACGTAATTGATGTTAAATATTCCAGCGTAATAAACGCATACGCACCAATTCTGCAATTTAGAGAACCAAACTGGCGTGGAGAGTTTGGCCCGATGCGTATAAAAATACCGTCAGGTTCCGCAAATTTGTATTCAAACAATACACAAACTCACTTTTTGCAGTACATGTCGTTTAACGCATCGAGTCCATTAGACCCGCTGCCAGATGCAGGTCGCGGTGTGAGAGTGTCTGACTGGCTGATAACATTTGCAATTAAACGTGCGTCTATTGGGGTTGCTGTAGCTGCATGGTTTCATCAATTCCTGGGCACATCTATTGCTGTGTTCTATAAATCTGCAACATCTATTGAAGTGTGCCGAATGACGAGCGGAATACTGAAAGAGGTCATTGCTGACGTGACGGGTAATTTCTCATCTGACTGGCACGTTCAGTTCGCGCAGGCATCAACCGGAAGCATAGTTAACGTAATTGATTCTACTGGAGTAGAGACAATCACGGCGATAACAGGAGTCTCAGGTGGCAGCATAGGTATCATTAATCTGAACGGAGAGGCTGCGGAGTTGGTCGTGGCTGGAGTGTCTGTGGAATTACCGCGAAACGGTCATATTGTTATCTAA

Genome Context

Tertiary structure

YP_009832393.1
ESMFold2 structure
Source ESMFold2
pLDDT 60.3
Oligomeric state monomer
Download structure