Protein

View in Explore
Genbank accession
QIG65182.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,79
Protein sequence
MKIQLLETNQTITGIAGTYVVAPGFQILHYNKPCLVRINVLSDEPQNSWVQAAAAVVDNLPGATLTLPIFDNSTIDLSVIASYLATFQKDLETGTGTQAARTVTLLFTVNPNGALKQYYFRIPVMNIDAPNLLRAKEMNGTDFLNDEGTKVPVAHAFTDQVWISPIGVNQELVYTLEGPSGNYEYNGRQGIVSEEEIHGSYDYLRVADSTTVLIDKYYAPLVPSDCAITFRWLNTTGSMDYISCYNWTVTPTIRRDSLGGTVTKNEIQAVFPVNNDNLNALSRLAVSPDIQIKGLLPDDKAVRAIGSTTSGVKITASGLNRTITLKFVY
Physico‐chemical
properties
protein length:329 AA
molecular weight: 36039,45340 Da
isoelectric point:5,03204
aromaticity:0,08815
hydropathy:-0,03283

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage SJC14
[NCBI] 		2710511 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG65182.1 [NCBI]
Genbank nucleotide accession
MT074152 [NCBI]
CDS location
range 8000 -> 8989
strand +
CDS
ATGAAGATACAATTACTTGAAACGAATCAGACTATCACAGGAATTGCCGGGACTTATGTAGTCGCGCCGGGATTTCAGATACTACACTACAATAAGCCTTGCCTTGTCCGTATAAACGTATTGAGCGACGAACCGCAAAATTCATGGGTACAAGCGGCGGCCGCAGTAGTTGACAATTTGCCGGGCGCAACTCTTACCTTGCCTATCTTTGATAACAGCACCATAGACCTTAGCGTTATTGCCTCGTACCTCGCCACTTTTCAGAAGGACCTAGAAACGGGCACCGGAACGCAGGCGGCAAGAACCGTTACCCTTTTGTTCACGGTGAATCCCAACGGGGCATTGAAGCAATATTACTTCCGCATCCCTGTTATGAACATTGACGCTCCGAATCTGCTTAGAGCAAAAGAAATGAACGGCACGGACTTCCTCAACGATGAAGGGACGAAGGTTCCGGTAGCCCACGCGTTCACCGACCAAGTTTGGATTTCTCCGATAGGGGTTAACCAAGAACTAGTATATACTTTGGAAGGTCCTTCCGGGAATTATGAGTATAACGGGAGACAGGGTATTGTATCCGAGGAAGAAATACACGGGAGTTATGACTATCTACGAGTAGCCGACAGCACGACCGTACTAATCGATAAGTATTATGCGCCCCTTGTACCTTCTGATTGCGCGATTACCTTCCGGTGGCTTAATACTACGGGGTCTATGGACTACATTTCGTGCTATAACTGGACGGTTACGCCCACGATTCGCCGGGATTCGCTAGGCGGAACGGTTACGAAGAACGAAATACAGGCGGTTTTCCCGGTGAATAACGACAATTTGAACGCTTTATCCCGCCTAGCGGTTAGCCCGGACATTCAAATTAAGGGACTGTTACCGGATGATAAGGCGGTTCGGGCGATTGGGTCTACCACTTCGGGCGTTAAAATAACGGCTTCGGGGCTTAACAGAACGATAACTTTAAAATTCGTGTACTAA

Tertiary structure

PDB ID
8da1a7e9a40a2c10be2fe0396b40a4d4aa205dca1561126069f2668a26bd7d32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3545
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank