Protein

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Genbank accession
YP_010078258.1 [GenBank]
Protein name
internal virion protein
RBP type
TF
Evidence RBPdetect2
Probability 0,48
Seq2Symm
H confidence 0,081
H 0,081
C3 0,051
C1 0,051
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTTLKLTAYSGEVPRTLPRLLADTAAQRAMNVRLDNGGLTPTRQPRFITTIGIDNAKTIYKHNGTWMAWPSVVHAAPGPVAQDRLYYMGDGKPKMIVDGTTYDLAVPMPTAAPALTVTGAGTGNVTSIAYVYTFVTAFGEESEPSALSNVAGWQSGQTRTLTGIQAPPAGRNITKQRFYRSQTGSGGTDLFFIEERAASAANFVDTHVANDFGEMLPSLEYNAPPDGLQGLISLPNGMMAAFMGKDLYFCEPFIPHAWPEKYILTMDYPIVALGAYGTTIVVMTEGLPYIVSGTAPENMQQQRVELNLPCINARGVIDLGYSVAYPSHDGLVMAGSNGMQVITEQLMTRNDWMKTGPGNIVGGQFNGRYFASYEYIEPSGAAFSGTLIFDTTGATPFIIRSNHKADAFFHELQTGALYFLVGKEIYEWDALGQANETLSWRSKQFVLPTPTNFGVILIEGSTAASEEEQAAYEAERQRIETENATNFALPSIGGEVNGAEVNLFAVNGDMMQRLPAEGFVSVSIYADGKLVKTVSKMNRMARLPSGFLARIWEIEVNSNINISDIVLATTGQELRNV
Physico‐chemical
properties
protein length:577 AA
molecular weight: 62634,25280 Da
isoelectric point:5,00282
aromaticity:0,09705
hydropathy:-0,09463

Taxonomy

Phage
Ralstonia phage Cimandef [NCBI] · taxon 2759720
Uroviricota Caudoviricetes Cimandefvirus Cimandefvirus cimandef
Host
Ralstonia pseudosolanacearum [NCBI] · taxon 1310165
Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia pseudosolanacearum

Coding sequence (CDS)

Genbank protein accession
YP_010078258.1 [NCBI]
Genbank nucleotide accession
NC_054956 [NCBI]
CDS location
range 35493 -> 37226
strand +
CDS
ATGACGACGCTGAAGCTGACTGCCTACTCTGGCGAGGTGCCGCGAACGCTGCCCAGGTTGCTGGCAGACACGGCCGCGCAGCGGGCGATGAACGTGCGCCTTGACAATGGTGGCCTGACGCCGACGCGGCAGCCGCGTTTCATCACGACCATTGGCATCGACAACGCCAAGACCATCTACAAGCACAACGGCACGTGGATGGCGTGGCCGAGCGTGGTGCACGCCGCGCCCGGCCCGGTGGCCCAGGACCGCCTCTACTACATGGGCGACGGCAAGCCGAAGATGATCGTCGACGGCACCACCTATGACTTGGCCGTGCCGATGCCGACCGCCGCGCCCGCGCTCACTGTGACTGGCGCGGGCACCGGCAATGTCACCAGCATCGCCTACGTCTACACCTTCGTCACCGCGTTCGGCGAGGAATCTGAGCCGTCCGCGCTCTCCAACGTCGCGGGCTGGCAGAGCGGGCAGACGCGCACGCTGACGGGCATCCAGGCGCCGCCAGCCGGCCGCAACATCACCAAGCAGCGTTTCTACCGGTCGCAGACCGGCAGCGGCGGCACCGACCTGTTTTTCATCGAGGAGCGCGCCGCGTCGGCTGCCAATTTCGTCGACACGCACGTGGCCAACGACTTCGGCGAGATGCTGCCGTCGCTGGAATACAACGCGCCGCCGGACGGCCTGCAAGGGCTGATCTCGCTGCCCAACGGCATGATGGCCGCGTTCATGGGCAAAGACCTGTATTTCTGCGAGCCGTTCATCCCGCACGCGTGGCCCGAGAAGTACATCCTGACGATGGATTACCCGATCGTGGCGCTCGGCGCCTACGGCACCACTATCGTCGTCATGACCGAGGGGCTGCCGTACATCGTGTCGGGCACTGCGCCGGAAAACATGCAGCAGCAGCGCGTCGAGCTGAACCTGCCGTGCATCAACGCGCGCGGCGTGATCGACCTGGGCTACTCGGTGGCATATCCGTCGCATGACGGGCTGGTGATGGCCGGTTCCAATGGCATGCAGGTTATCACCGAGCAGCTGATGACGCGCAACGACTGGATGAAGACCGGGCCGGGCAACATCGTCGGCGGCCAGTTTAATGGCCGGTATTTCGCGAGCTACGAGTACATCGAGCCGAGCGGCGCAGCCTTCAGCGGCACGCTGATCTTCGACACGACTGGCGCGACACCCTTCATCATCCGCTCGAACCATAAGGCGGACGCCTTCTTTCACGAGTTGCAGACCGGAGCGCTCTACTTCCTGGTAGGCAAGGAGATTTACGAGTGGGACGCGCTCGGGCAGGCCAACGAGACGCTGAGCTGGCGGTCCAAGCAATTCGTGCTCCCGACGCCGACCAACTTCGGCGTCATCCTGATCGAGGGCAGCACTGCCGCCAGCGAAGAGGAGCAGGCTGCATACGAGGCTGAGCGCCAGCGCATCGAGACGGAGAACGCGACGAACTTCGCGCTGCCGTCCATCGGCGGCGAGGTGAACGGCGCCGAGGTCAACCTGTTCGCGGTCAATGGCGACATGATGCAGCGGCTGCCGGCCGAGGGATTCGTGAGCGTGTCGATCTACGCTGACGGCAAGCTGGTCAAGACCGTGAGCAAGATGAACAGGATGGCGCGGCTGCCGTCAGGCTTCCTTGCGCGCATCTGGGAAATCGAGGTCAACAGCAACATCAACATCTCCGACATCGTGCTGGCGACCACCGGCCAAGAACTGAGGAACGTGTGA

Genome Context

Tertiary structure

YP_010078258.1
ESMFold2 structure
Source ESMFold2
pLDDT 90.2
Oligomeric state monomer
Download structure