Protein

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Genbank accession
XQQ55857.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MFYGCKAPNIKIMVNAIGTKAKAWYFKESSATMVASTPNEYKYGIKNCYKNAVVSLVSKIYMYKYSFSNNGNNLDGTQEQSLLYCNQQGELTGDDLKLDNNGSKNCNGWLYYCGYGSKMTLTNPSITNNKSAANILNNNNSYMNLQYANFTGSKAANLLLCYNGAHNKYKR
Physico‐chemical
properties
protein length:171 AA
molecular weight: 19124,41790 Da
isoelectric point:9,26393
aromaticity:0,12865
hydropathy:-0,56959

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQQ55857.1
1 171
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0042
Central domain 11 160 151 0,9926
C-terminal 161 171 10 0,5836
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-160
C-terminal
161-171

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage PT14_12670_16
[NCBI] 		3410872 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQQ55857.1 [NCBI]
Genbank nucleotide accession
PV052266.1 [NCBI]
CDS location
range 72687 -> 73202
strand -
CDS
ATGTTTTATGGTTGCAAAGCACCTAATATTAAAATTATGGTTAATGCTATAGGAACTAAAGCAAAAGCATGGTATTTTAAAGAAAGTTCTGCTACTATGGTTGCTTCAACACCTAATGAATACAAATATGGTATTAAAAATTGTTATAAAAATGCAGTTGTATCATTAGTCTCTAAAATTTATATGTACAAATATAGCTTTAGCAACAATGGTAACAATTTAGATGGAACACAAGAGCAATCATTATTATATTGTAATCAGCAAGGTGAATTAACGGGAGATGATTTAAAATTAGATAATAATGGTAGTAAAAACTGTAATGGATGGTTATATTATTGTGGATATGGTTCTAAAATGACATTAACTAATCCATCAATTACAAATAATAAATCTGCTGCTAATATATTAAATAATAATAATTCTTATATGAATCTACAATATGCTAATTTTACAGGTTCAAAAGCAGCAAATTTATTATTATGTTATAATGGTGCTCATAACAAATATAAAAGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d1bce87092f7b6096e04f7369be3aee5bf957586ae4cf7aebdcb6e6a21490355
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7775
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Campylobacter and Salmonella phages isolated in the United Kingdom Mutai,I.J., Gurusinghe,A., Clarke,M., Wang,B., Connerton,P. and Bhandare,S.G. 2021-12-15 — GenBank