Protein

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Genbank accession
QZI86420.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSRTLQQLNYNSFTGGLITEASPLTFPDGASIEENNFELTKQGFRRRRLGLDAVSPDTLLNNRITDPAEITTFLWDNNGISGQQFLAVGMRNEILIYDVTDSVPGERLVYQTEISGQRKVSFTSHAGQLIIANGERDITILSSLGDNLFSERKENLMIRDRVGLPDYVRATETRPRVSLLNAERANYRPSSNELYLSYTYPVDTGVDGEGGDDPIEVTPEQLITYTFSNKRELSRETIDGVTTVRTGLTHNTRYSHFQGFPIDSFVLTAKTGAVTEYSISVIFKEGFYRSAIGTPDLSYTVIFEKGGTEYINNRLTLSEYNGFLNLTRPLKLQESNWNTHPHQYNLWNQGWGESRMTPDNNTGLIRPIDTFHKQTHLLPANADNINSALYPNNQNDSNRTAERFHPEDLEANPQGSSVAPQGRYVIDALNRGESRGQVWGDDLREKGEDQRAFRSRLSYERTTGGCTTVAEYAGRVWYAGFSGDTAGSTLKMSNKILYSQTGNDDLTSCYQEADPTSISDAALVDTDGGWVGIDGIDEVIKLVPTDTSLVVFATNGVWVIAGVDGNSFTPTSSMVLKVTDKGPLNAENIIQVDSDLHFWAEDGLYQLQSNGFATFNVNPMTKLTINSLILDLSEEDFRSMSGAYDERLDRLIWVIDGAVDVSARREIIYHLAFQSFTINTFYKEDSGSETKEVVGVVKTPQFISSAMNVSVVEGFDNIVEGPDNIVIETSERDGKPSRVAYLSLRNTNNNTYLFFSDLVRDDFADWGTVDAPAHLLTGYVTGGDTSRQKQVPNLTVHCNRTETTATEEGVKNESSCLLRSQWEWTDDPYANKWGPTTQVYRLPRPQIRGIDQPVAEGIQVVTTRNKLRGRGRTVSLMFSTEAGKDCQLLGWSMIVGASDNV
Physico‐chemical
properties
protein length:901 AA
molecular weight: 100328,00380 Da
isoelectric point:4,82338
aromaticity:0,09101
hydropathy:-0,45916

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI86420.1
1 901
Domain Start End Length (AA) Confidence
N-terminal 1 167 167 0,9889
Central domain 168 466 300 0,6697
C-terminal 467 901 434 0,1518
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-167
Central
168-466
C-terminal
467-901

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PS35B.3
[NCBI] 		2859298 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86420.1 [NCBI]
Genbank nucleotide accession
MW865307 [NCBI]
CDS location
range 7325 -> 10030
strand +
CDS
ATGTCAAGGACACTACAACAGCTTAATTATAACTCCTTCACTGGGGGTCTAATTACTGAAGCGTCTCCTCTAACGTTTCCAGATGGTGCGTCTATCGAGGAGAACAACTTCGAATTAACTAAGCAAGGTTTCCGACGCAGACGTCTAGGTCTAGATGCAGTGTCTCCAGATACCTTACTTAACAACAGAATTACAGATCCTGCTGAGATTACAACTTTCTTGTGGGACAACAACGGCATCTCTGGTCAACAGTTCCTAGCTGTCGGTATGCGTAACGAGATCCTTATCTATGATGTGACTGACAGCGTACCCGGCGAACGTTTAGTTTATCAAACAGAGATCAGTGGTCAACGCAAAGTTAGTTTCACTTCTCATGCAGGTCAGCTTATCATCGCTAACGGTGAACGCGATATCACTATCCTGTCCTCACTCGGCGACAATCTATTCTCTGAGCGTAAAGAGAACTTGATGATTCGTGATAGAGTAGGTCTTCCAGATTATGTGAGAGCTACAGAGACCCGTCCAAGAGTAAGTCTCCTGAATGCAGAGAGAGCTAACTATCGCCCTTCTAGTAACGAACTATACTTGTCTTACACTTATCCTGTAGATACAGGTGTAGATGGAGAGGGTGGAGATGACCCGATTGAGGTGACTCCTGAACAGTTGATTACATACACCTTCTCTAACAAGCGTGAGTTATCTCGTGAGACTATTGACGGTGTTACAACTGTCCGTACTGGATTAACGCACAATACAAGATACAGTCACTTTCAAGGTTTCCCTATTGACAGTTTTGTACTAACTGCAAAGACAGGTGCTGTAACAGAATATAGTATTAGTGTCATCTTTAAAGAAGGTTTCTACCGCTCAGCGATTGGTACACCAGACTTGTCATACACTGTCATCTTCGAGAAAGGCGGTACAGAGTATATAAACAATCGTTTGACTCTAAGTGAGTATAACGGTTTCTTGAACCTGACTCGTCCTTTGAAGCTACAAGAAAGTAACTGGAACACCCACCCTCACCAATATAATCTTTGGAATCAGGGCTGGGGCGAATCACGTATGACACCTGATAATAACACTGGTCTCATTCGTCCTATTGATACTTTCCATAAACAGACTCATCTACTTCCAGCTAACGCAGATAATATCAACTCTGCATTGTACCCAAACAATCAGAACGATAGTAACCGTACTGCTGAGAGATTCCACCCAGAAGACCTAGAGGCTAACCCTCAAGGTTCTAGTGTAGCTCCTCAAGGACGTTATGTCATTGATGCGTTAAACAGAGGTGAATCTCGTGGACAGGTATGGGGTGATGACCTAAGAGAGAAAGGAGAAGACCAACGTGCTTTCCGTTCTCGTCTGAGTTATGAGAGAACAACTGGTGGTTGTACCACTGTTGCTGAATACGCAGGTCGTGTTTGGTATGCAGGTTTCTCAGGTGACACAGCGGGTTCTACCCTGAAGATGTCTAATAAGATATTGTACAGTCAAACAGGTAATGATGATTTAACTTCATGTTACCAAGAGGCTGACCCAACAAGTATTTCAGATGCTGCTCTTGTAGACACTGATGGCGGTTGGGTAGGTATTGATGGTATTGATGAGGTTATTAAACTTGTACCTACTGATACATCTCTAGTAGTGTTTGCTACTAATGGTGTATGGGTTATTGCAGGGGTAGATGGTAACTCATTCACACCTACAAGCTCAATGGTCTTGAAGGTTACAGACAAAGGTCCACTGAACGCAGAGAACATTATTCAGGTAGATTCTGATTTACACTTCTGGGCAGAAGATGGCTTATACCAATTACAGAGTAATGGTTTTGCTACGTTCAATGTTAACCCTATGACTAAGCTCACAATCAATAGCCTTATCCTTGACCTATCAGAAGAAGATTTCCGAAGTATGTCAGGAGCTTACGATGAGCGTCTTGATAGACTTATCTGGGTTATTGATGGAGCAGTTGATGTCAGCGCTAGACGTGAGATCATCTATCACCTCGCTTTCCAGAGCTTCACTATTAACACTTTCTATAAAGAAGACAGTGGTTCTGAAACTAAAGAAGTAGTAGGTGTTGTTAAGACCCCTCAGTTCATTTCATCAGCAATGAATGTTAGCGTTGTTGAGGGCTTTGATAACATTGTCGAAGGTCCAGATAACATTGTTATTGAGACTTCAGAGAGAGATGGTAAACCTTCAAGGGTTGCATATCTATCTTTGCGTAACACTAACAACAATACATATCTATTCTTCTCAGACTTAGTTAGAGATGACTTTGCAGACTGGGGTACAGTAGATGCTCCTGCTCACTTATTAACAGGTTATGTGACTGGTGGTGATACTTCACGTCAGAAACAAGTACCTAACTTAACAGTTCATTGTAATCGTACAGAGACGACAGCAACTGAAGAAGGTGTTAAGAATGAGTCAAGCTGTCTATTACGTAGTCAGTGGGAGTGGACTGATGACCCTTACGCTAACAAGTGGGGACCAACAACCCAAGTATACCGTTTACCTCGCCCACAAATTAGAGGTATTGATCAGCCAGTAGCTGAAGGTATTCAGGTGGTCACTACGCGTAATAAGTTACGAGGTCGAGGTAGAACAGTCAGTCTTATGTTCTCTACGGAGGCAGGGAAGGATTGTCAACTACTAGGTTGGAGTATGATTGTAGGAGCTAGTGATAATGTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
22558bfa7b18e59da6597b90c0908ddaf90c385410e5323c2b426b824cfb3827
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2802
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank