Protein

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Genbank accession
XOD32266.1 [GenBank]
Protein name
long-tail fiber proximal subunit
RBP type
TF
Evidence RBPdetect2
Probability 0,55
Seq2Symm
C1 confidence 0,844
C1 0,844
D3 0,408
C3 0,280
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAEIKRKFRAEDGLDAGGDKIINVALADRTVGTDGVNVDYLIQENTVQQYDPTRGYLKDFVIIYNNRFWAATDNIPKPAGSFNRIRWKALRTDAVYTTVSSGPYQLKSGEAISVDTSVGNDIEFNLPPSPLDGETVIIQDIGGKPGINQV
Physico‐chemical
properties
protein length:150 AA
molecular weight: 16464,22810 Da
isoelectric point:4,80184
aromaticity:0,08667
hydropathy:-0,36200

Taxonomy

Phage
Shigella phage sb3 [NCBI] · taxon 3387548
Shigella phage sb3
Host
Shigella flexneri [NCBI] · taxon 623
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella flexneri

Coding sequence (CDS)

Genbank protein accession
XOD32266.1 [NCBI]
Genbank nucleotide accession
PQ666541 [NCBI]
CDS location
range 151879 -> 152331
strand +
CDS
ATGGCCGAGATTAAAAGAAAGTTCAGAGCAGAAGACGGTCTGGACGCAGGTGGCGATAAAATAATCAACGTAGCTTTAGCTGATCGTACCGTAGGAACTGACGGTGTTAACGTTGATTACCTAATTCAAGAAAACACAGTTCAACAATATGATCCAACTCGTGGATATTTAAAAGATTTTGTAATCATTTATAATAATCGTTTTTGGGCAGCAACGGATAATATTCCAAAACCTGCTGGAAGTTTTAACAGAATTCGTTGGAAAGCATTACGTACTGATGCCGTATATACAACCGTATCATCTGGACCATATCAATTAAAATCCGGAGAAGCAATTTCAGTAGATACATCAGTTGGTAATGACATTGAGTTTAATTTACCGCCTTCTCCGCTTGATGGAGAAACCGTAATAATTCAAGATATTGGTGGAAAACCTGGTATAAATCAGGTTTAA

Genome Context

Tertiary structure

XOD32266.1
ESMFold2 structure
Source ESMFold2
pLDDT 79.5
Oligomeric state monomer
Download structure