Protein

View in Explore
Genbank accession
YP_009812543.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,92
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MANVSDKSILTAAGKALLAQLNAEEKALVIDKMIFANVPNRPEYPQPDDVVPTDNVVHQAAVEQRGRLSEDSVIYSTTLASNEGPFEFNWTGAYCSEYGVLVTIDHHSLTPKTVDEPGVSGNTLVRSVVLEYKDIAEITNITVDASTWQYNATPRMKKMDDDVAQANIDQNGKDWFIEEGFLVTPQASAFSIKAGAGYVSGNRVALEFDRSIQVPNKPSFIYIDAHREGTPTGEQVTLFDFVVSAEEKDDYIDSSTGKDVAHFICKIAQVLGDGSVSDLRLEGESAGKDWVSGNFNQVFQSVSSLKKAEVKAGTLVQTISYHDGWAAKLRHPVGGGLYFITEVNSVPALDGKFDFHVGNGLAAVLTKSSVLNVYQAGAYGDKSYDDQPIIQHVLDYAESNNKRVVEVPDGHYSLYSTLSVPRSVQLIGNGCETWTHDEGTVFWGEHNDVIVMVGRENMPSTYRNRGMHIEAFKVVGRDMVGCGVSTPRTSKNSERPSAYNWSARRVVVKQSLVGFQYDSTWHVQADQCVALDCDIGHRYQGIGGTSSNFNGLLAYSTRKGYEFLGDGWTYSSWNSCGSDGSEIALDLKGGSFRGSSFRNFGFENTSRIGLLIDNSNAIAIFDGLNIGIHDNPSVTMISVNSAELVKLNDVRCTSSVLNQCRFISINQIGSLGRVVFDNLSLYSGNGGDVGDIYHEKVMLRDSNIDGVKYTHAVGGLDGKDSSLVGYTSSDQNKSNLAVIATHILAQADVDGASRYLTGLPVFDTSNIPDFETVKFTNVGGGEFGFRTEEYTAGTGIVRNPTLSPTTTVRLTTPGDYVVFQKRPDGKLYEIEKFVV
Physico‐chemical
properties
protein length:835 AA
molecular weight: 90999,23970 Da
isoelectric point:5,04346
aromaticity:0,09341
hydropathy:-0,25521

Domains

View on InterPro
Domain architecture
YP_009812543.1
1 835 aa
ATT 8–147 · STR 361–704 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009812543.1
1 835 aa
Domain Start End Length (AA) Confidence
N-terminal 1 387 387 0,9937
Central domain 388 721 335 0,9719
C-terminal 722 835 113 0,9572
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Vibrio phage 1.202.O._10N.222.45.E8 [NCBI] · taxon 1881262
Uroviricota Caudoviricetes Peduoviridae Canoevirus canoe
Host
Vibrio cyclitrophicus [NCBI] · taxon 47951
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Coding sequence (CDS)

Genbank protein accession
YP_009812543.1 [NCBI]
Genbank nucleotide accession
NC_048066.1 [NCBI]
CDS location
range 27351 -> 29858
strand +
CDS
ATGGCAAATGTATCTGATAAATCAATTTTAACCGCAGCAGGTAAAGCGCTATTGGCGCAGCTTAATGCGGAAGAAAAGGCGCTGGTCATCGATAAGATGATTTTTGCGAATGTGCCAAACCGCCCAGAGTACCCGCAACCGGATGATGTGGTACCGACTGATAATGTGGTTCATCAAGCTGCCGTTGAGCAACGTGGCCGACTTTCGGAAGATTCGGTGATTTACAGCACTACGCTTGCCAGTAATGAAGGGCCGTTTGAGTTCAACTGGACGGGTGCTTACTGTTCTGAATACGGTGTTTTAGTAACGATTGACCACCATTCACTGACGCCAAAAACGGTCGATGAGCCGGGTGTTTCGGGTAATACGTTGGTGCGTTCGGTTGTGCTTGAGTACAAGGATATTGCTGAAATCACCAATATCACGGTGGACGCTTCAACATGGCAATACAACGCAACACCACGCATGAAGAAAATGGACGATGATGTAGCCCAAGCGAACATCGACCAAAACGGCAAAGATTGGTTTATCGAAGAAGGTTTCTTGGTTACGCCTCAAGCCTCTGCATTCAGTATTAAAGCGGGTGCCGGTTATGTGTCGGGCAACCGTGTCGCCCTTGAATTTGATCGCAGCATTCAAGTACCGAACAAGCCATCGTTCATTTATATCGATGCGCACCGCGAAGGAACGCCAACAGGTGAGCAAGTTACGTTGTTCGATTTTGTTGTGTCTGCAGAAGAGAAAGACGATTACATCGACTCTTCAACGGGTAAGGATGTTGCGCACTTTATTTGCAAAATTGCGCAAGTGTTGGGTGATGGTTCGGTTAGTGACTTAAGGCTGGAGGGGGAGAGTGCGGGGAAAGATTGGGTCTCTGGGAATTTTAATCAAGTCTTTCAATCTGTTTCATCTCTGAAAAAAGCAGAAGTTAAGGCAGGTACATTGGTTCAAACAATCTCTTATCATGACGGATGGGCAGCCAAGCTTCGTCATCCTGTTGGGGGTGGTTTGTATTTTATTACTGAGGTGAACAGTGTTCCTGCTCTTGATGGTAAGTTTGACTTCCACGTAGGTAACGGTTTAGCCGCTGTATTAACAAAATCATCGGTGCTTAATGTTTATCAAGCGGGTGCATATGGAGATAAGTCTTATGATGATCAACCGATTATTCAGCATGTTTTAGATTATGCAGAAAGCAATAATAAACGGGTGGTTGAAGTACCAGATGGCCACTACTCCCTCTATTCTACTCTTTCGGTTCCTAGGTCTGTACAGCTAATCGGCAATGGTTGTGAAACATGGACCCACGATGAGGGCACAGTTTTTTGGGGGGAACATAATGATGTTATCGTTATGGTTGGTCGAGAAAACATGCCAAGCACCTACCGAAATAGAGGTATGCACATTGAAGCATTTAAGGTGGTCGGTCGTGATATGGTGGGATGTGGCGTATCAACTCCAAGAACATCAAAAAATTCTGAAAGACCGTCGGCATACAATTGGTCAGCAAGGCGAGTCGTAGTGAAACAAAGCCTTGTTGGATTTCAATATGATAGTACATGGCATGTACAGGCAGACCAGTGTGTGGCGTTAGATTGCGACATTGGACACCGTTATCAAGGGATCGGAGGAACAAGCTCAAACTTTAATGGGCTTCTAGCTTACAGCACTCGGAAAGGATATGAATTTTTAGGAGATGGTTGGACATACAGTTCTTGGAATTCTTGTGGCTCAGATGGTTCAGAAATCGCGCTAGATTTAAAAGGGGGATCATTCAGAGGTTCGTCATTTCGTAACTTTGGATTTGAAAACACATCAAGAATTGGATTGCTGATCGACAATTCTAACGCAATTGCCATTTTTGACGGTCTTAATATTGGAATACATGATAATCCCTCCGTCACCATGATTTCCGTCAATAGTGCTGAGCTTGTTAAGCTGAATGATGTTCGTTGTACATCCAGCGTTCTAAATCAGTGTCGGTTTATCTCAATTAACCAAATAGGCTCACTTGGCCGAGTTGTCTTTGATAATTTATCTCTTTATAGCGGTAATGGTGGTGATGTCGGTGATATTTACCACGAAAAAGTCATGCTCAGAGATAGTAATATCGACGGGGTTAAATACACCCACGCAGTAGGTGGGCTGGATGGTAAAGACTCAAGTTTAGTAGGTTATACATCTAGCGATCAGAATAAATCTAATTTGGCTGTTATAGCTACACATATTTTAGCTCAAGCGGATGTCGACGGAGCCAGTCGTTATCTTACAGGTTTGCCTGTTTTTGATACGTCAAACATTCCAGATTTTGAAACCGTTAAATTCACGAATGTTGGCGGTGGTGAGTTTGGATTTAGAACTGAAGAATATACAGCTGGAACGGGAATTGTTAGAAATCCTACGCTGTCACCAACAACAACGGTAAGGTTGACTACTCCTGGAGATTACGTGGTCTTCCAAAAGAGACCTGATGGTAAGCTTTATGAAATTGAAAAGTTTGTGGTTTAA

Genome Context

Tertiary structure

YP_009812543.1
ESMFold structure
Source ESMFold
pLDDT 79.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank