Protein

View in Explore
Genbank accession
YP_009812543.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MANVSDKSILTAAGKALLAQLNAEEKALVIDKMIFANVPNRPEYPQPDDVVPTDNVVHQAAVEQRGRLSEDSVIYSTTLASNEGPFEFNWTGAYCSEYGVLVTIDHHSLTPKTVDEPGVSGNTLVRSVVLEYKDIAEITNITVDASTWQYNATPRMKKMDDDVAQANIDQNGKDWFIEEGFLVTPQASAFSIKAGAGYVSGNRVALEFDRSIQVPNKPSFIYIDAHREGTPTGEQVTLFDFVVSAEEKDDYIDSSTGKDVAHFICKIAQVLGDGSVSDLRLEGESAGKDWVSGNFNQVFQSVSSLKKAEVKAGTLVQTISYHDGWAAKLRHPVGGGLYFITEVNSVPALDGKFDFHVGNGLAAVLTKSSVLNVYQAGAYGDKSYDDQPIIQHVLDYAESNNKRVVEVPDGHYSLYSTLSVPRSVQLIGNGCETWTHDEGTVFWGEHNDVIVMVGRENMPSTYRNRGMHIEAFKVVGRDMVGCGVSTPRTSKNSERPSAYNWSARRVVVKQSLVGFQYDSTWHVQADQCVALDCDIGHRYQGIGGTSSNFNGLLAYSTRKGYEFLGDGWTYSSWNSCGSDGSEIALDLKGGSFRGSSFRNFGFENTSRIGLLIDNSNAIAIFDGLNIGIHDNPSVTMISVNSAELVKLNDVRCTSSVLNQCRFISINQIGSLGRVVFDNLSLYSGNGGDVGDIYHEKVMLRDSNIDGVKYTHAVGGLDGKDSSLVGYTSSDQNKSNLAVIATHILAQADVDGASRYLTGLPVFDTSNIPDFETVKFTNVGGGEFGFRTEEYTAGTGIVRNPTLSPTTTVRLTTPGDYVVFQKRPDGKLYEIEKFVV
Physico‐chemical
properties
protein length:835 AA
molecular weight: 90999,23970 Da
isoelectric point:5,04346
aromaticity:0,09341
hydropathy:-0,25521

Domains

Domains [InterPro]
IPR022225
8–147
IPR022225 IPR012334
IPR011050
362–667
IPR011050
IPR024535
371–445
IPR024535
YP_009812543.1
1 835
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.202.O._10N.222.45.E8
[NCBI] 		1881262 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009812543.1 [NCBI]
Genbank nucleotide accession
NC_048066.1 [NCBI]
CDS location
range 27351 -> 29858
strand +
CDS
ATGGCAAATGTATCTGATAAATCAATTTTAACCGCAGCAGGTAAAGCGCTATTGGCGCAGCTTAATGCGGAAGAAAAGGCGCTGGTCATCGATAAGATGATTTTTGCGAATGTGCCAAACCGCCCAGAGTACCCGCAACCGGATGATGTGGTACCGACTGATAATGTGGTTCATCAAGCTGCCGTTGAGCAACGTGGCCGACTTTCGGAAGATTCGGTGATTTACAGCACTACGCTTGCCAGTAATGAAGGGCCGTTTGAGTTCAACTGGACGGGTGCTTACTGTTCTGAATACGGTGTTTTAGTAACGATTGACCACCATTCACTGACGCCAAAAACGGTCGATGAGCCGGGTGTTTCGGGTAATACGTTGGTGCGTTCGGTTGTGCTTGAGTACAAGGATATTGCTGAAATCACCAATATCACGGTGGACGCTTCAACATGGCAATACAACGCAACACCACGCATGAAGAAAATGGACGATGATGTAGCCCAAGCGAACATCGACCAAAACGGCAAAGATTGGTTTATCGAAGAAGGTTTCTTGGTTACGCCTCAAGCCTCTGCATTCAGTATTAAAGCGGGTGCCGGTTATGTGTCGGGCAACCGTGTCGCCCTTGAATTTGATCGCAGCATTCAAGTACCGAACAAGCCATCGTTCATTTATATCGATGCGCACCGCGAAGGAACGCCAACAGGTGAGCAAGTTACGTTGTTCGATTTTGTTGTGTCTGCAGAAGAGAAAGACGATTACATCGACTCTTCAACGGGTAAGGATGTTGCGCACTTTATTTGCAAAATTGCGCAAGTGTTGGGTGATGGTTCGGTTAGTGACTTAAGGCTGGAGGGGGAGAGTGCGGGGAAAGATTGGGTCTCTGGGAATTTTAATCAAGTCTTTCAATCTGTTTCATCTCTGAAAAAAGCAGAAGTTAAGGCAGGTACATTGGTTCAAACAATCTCTTATCATGACGGATGGGCAGCCAAGCTTCGTCATCCTGTTGGGGGTGGTTTGTATTTTATTACTGAGGTGAACAGTGTTCCTGCTCTTGATGGTAAGTTTGACTTCCACGTAGGTAACGGTTTAGCCGCTGTATTAACAAAATCATCGGTGCTTAATGTTTATCAAGCGGGTGCATATGGAGATAAGTCTTATGATGATCAACCGATTATTCAGCATGTTTTAGATTATGCAGAAAGCAATAATAAACGGGTGGTTGAAGTACCAGATGGCCACTACTCCCTCTATTCTACTCTTTCGGTTCCTAGGTCTGTACAGCTAATCGGCAATGGTTGTGAAACATGGACCCACGATGAGGGCACAGTTTTTTGGGGGGAACATAATGATGTTATCGTTATGGTTGGTCGAGAAAACATGCCAAGCACCTACCGAAATAGAGGTATGCACATTGAAGCATTTAAGGTGGTCGGTCGTGATATGGTGGGATGTGGCGTATCAACTCCAAGAACATCAAAAAATTCTGAAAGACCGTCGGCATACAATTGGTCAGCAAGGCGAGTCGTAGTGAAACAAAGCCTTGTTGGATTTCAATATGATAGTACATGGCATGTACAGGCAGACCAGTGTGTGGCGTTAGATTGCGACATTGGACACCGTTATCAAGGGATCGGAGGAACAAGCTCAAACTTTAATGGGCTTCTAGCTTACAGCACTCGGAAAGGATATGAATTTTTAGGAGATGGTTGGACATACAGTTCTTGGAATTCTTGTGGCTCAGATGGTTCAGAAATCGCGCTAGATTTAAAAGGGGGATCATTCAGAGGTTCGTCATTTCGTAACTTTGGATTTGAAAACACATCAAGAATTGGATTGCTGATCGACAATTCTAACGCAATTGCCATTTTTGACGGTCTTAATATTGGAATACATGATAATCCCTCCGTCACCATGATTTCCGTCAATAGTGCTGAGCTTGTTAAGCTGAATGATGTTCGTTGTACATCCAGCGTTCTAAATCAGTGTCGGTTTATCTCAATTAACCAAATAGGCTCACTTGGCCGAGTTGTCTTTGATAATTTATCTCTTTATAGCGGTAATGGTGGTGATGTCGGTGATATTTACCACGAAAAAGTCATGCTCAGAGATAGTAATATCGACGGGGTTAAATACACCCACGCAGTAGGTGGGCTGGATGGTAAAGACTCAAGTTTAGTAGGTTATACATCTAGCGATCAGAATAAATCTAATTTGGCTGTTATAGCTACACATATTTTAGCTCAAGCGGATGTCGACGGAGCCAGTCGTTATCTTACAGGTTTGCCTGTTTTTGATACGTCAAACATTCCAGATTTTGAAACCGTTAAATTCACGAATGTTGGCGGTGGTGAGTTTGGATTTAGAACTGAAGAATATACAGCTGGAACGGGAATTGTTAGAAATCCTACGCTGTCACCAACAACAACGGTAAGGTTGACTACTCCTGGAGATTACGTGGTCTTCCAAAAGAGACCTGATGGTAAGCTTTATGAAATTGAAAAGTTTGTGGTTTAA

Tertiary structure

PDB ID
74b8b5340cbc4ecda1bc2e92992a1bc48b414d002d253a505b698dc73b404416
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7978
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank