Phage RBP Database

Genbank accession

AXH66313.1 [GenBank]

Protein name

tail spike protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,48

Protein sequence

MPLPPERVVTGTYVNPVNGEPYDGSNGDHYLIFEPVPDRWTDRAGNQILLGGGKVTLDENGHFSEDLVCTDAADVYPVEGRLWRVRQFVGGSWDSGTFALPEGDDPLDITDILSVDICGVDYVPVPGPPGPQGPPGPPDGPPGPPGPEGASAYEVAVEQGFSGTEDEWLASLQGEQGEPGATGGPGPQGEPGTPGEDGPSAYQVALDNGFVGTEAQWLASLQGPAGTDGAPGPEGDSAYEVAVENGFEGSEAQWLISLRGAPGAPGDTGPQGEPGPEGPSAYEVAVSGGFSGTEAEWLASLVGPEGDTGATGATGPAGDSAYQVALDEGFVGTEEEWLASLVGPQGPAGRDGGMDTGISLGGDITASETDPLAVVINPLTGRIVDYFADPVTITDVEVTSPITVTLDSVAQERTITWLLMDADQIVYQQQARPSPEDRRSFLVLGMVAQDDGEIFLAQSIPTIARQPVNQLYDLMDAIGAFGIMGNDVSPNGANLQLNVGAGQVFSRGWNHFDGGTETINPHIVTTLGATPASWTHALRSSDLEHASASTTVDVGHYDLNGTLTAVGGDTDTSVVHQLWMFPTNEGSEVHILQYGQQLFDTLEDAISGAGTAAFVTNTALPGNAIMLGYLAVRGVATDLSDAAQAMFIKAGKFGASPGGGASVDLSGYAMLAGAEFTGQIATNMAQPDAVAQSSRVTTNGSDSWRRQVDGEMQWGPGDGPMDAFLRRLGIGMLAFLNTDLLVGQEDAKSYRFRQSGTSLDLDASGADLFLSVFELVNFLGEQYTYLRLESGEFTAHASGKWVFGDGPFDGAGHTLDGTANQAGFFGATPVGQQTVSGARTTGAGLQSLLDALEALGLIVDSTTAGVAVVETVNGQAGPDVSLTASDVGVGDVIVAANDSRNKDGADFVCTGTNDHLVIQQAIDLVDAAPGKGTVRLLDGTFWLGATVTIPSGAGLNLTGTGWGTVLKISPGVEDYAITFDGDETRARFSHFRIDGNLSGQTAGPCGGIWAAGAVECVFQHINFSHCWSAGLVLTAINGGAFGHNNYVLHCLFDNGMTSTEEGNGIYLSSSDENFIVACDFQFLGGAFGAGGAGIYDQAGTQTILGCNFVGGGNSLPAIRVQDASATKITACNFDGVGGDAVFLAATNCLVEGNTIFGVGAIGTAGTFSGIHLEYGATGNLIANNSISSHTVNGAARSLIREESVGDSGNNLVVGNMLITKGTLSVGALDLNAPGTIARSNFGGGADGDPVVTTDMIGVADGVASLDATGKVPAAQMPDGLVTSVNGEDGDVTLTAADVGALDEAAGDARYTQQDALYLNAKEHGAVGDETTDDSTVINALLSTSPAGSTVVLPPGTYGISVPLVVPPGKTLMGLRTNLMQITDVYDPQVSIKPLAGFTGVAAVRFLDQATGGYDDISGEQRLIDIMLDGSALTAGVDGLQAKGNIQNVGLRDVTIRFFPNSGIYSGLEGGIGPYSWRMHRVMLDNNHAHGMYAEKMVDLTMVDCQAIGNWSNGFMLNNAANSQAVACRAEWSGNHGFYLTGDWGDGQGSGGMLLSACSTDRNGFNGVFIDSTGNAPIVISNLMTRRDGRNGGTGGGGYAGLAVNAAEMPVIVGDWTNYPGVDDNGASTSSPDYGASVTGSTHVQIDNAYLHAATAGLNDGGGNTALILGANITYATGATTAPVRAVQQLAAARIPDLAASKVTSGTFDAARIPDLAASKVTSGTFDAARIPALNYVPTGSAVLLTGAQTVGGLKTFSSGLAVKDGTNAGDVHIKDSQDVNLLVVESSNATAAAGVMKLIAGQASQAAFLGTWMGAATNAWSIRADGRLEAGDGATGRDTYLTRTAAGVWQVTSQIRASASAPANAADLTRKDYVDGLDTANVKLTGAQTVAGIKTFSSIPVGPASNPTTDSQLARKAYVDQMEPNGFAPDDIGLLAWSSDPACCVSTPAFCGVGVMRMTAVVLHTAQTVGKIVWYAGGYAGGLLSGSWAGIWNAAGTTRLAGVAAMHTGASEPAEVHNAGGAMHYAPLDGGSVSLAAGVYLVAWRHVYTASPADGPMILQYENAAGSPPNTLALNTVKRFGYITSGASTLPSSISGVLTDGGNRFWVGLAT

Physico‐chemical properties

protein length:	2111 AA
molecular weight:	216104,70790 Da
isoelectric point:	4,26272
aromaticity:	0,07153
hydropathy:	-0,01421

Domain architecture

AXH66313.1

1 2111 aa

STR 125–170 · STR 894–1247 · STR 1310–1688 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:1.20.5.320
STR

G3DSA:1.20.5.320 IPR011050 IPR011050

PTHR24637
Unmapped

PTHR24637 IPR012334 IPR012334

IPR006626
Unmapped

IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR024535 IPR006626 IPR006626 IPR006626 IPR006626

IPR039448
ENZ

IPR039448

AXH66313.1

12111 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1109
ATT

DC_1109 DC_1967 DC_1725 DC_0775 DC_2249 DC_0770 DC_0232

DC_1967
ATT

DC_1967 DC_1725

AXH66313.1

12111 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	125	170	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
PTHR24637	Unmapped	-	125	353	PANTHER	COLLAGEN	-	-	-	-
IPR011050	STR	IPR011050	894	1225	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	906	1247	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	983	1012	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	1007	1186	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	1013	1035	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1042	1069	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1123	1144	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1145	1174	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR011050	STR	IPR011050	1310	1656	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	1318	1688	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR024535	ENZ	DC_0410	1318	1381	InterPro cluster	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain	Central	High	Text match	420 proteins / 426 hits
IPR006626	Unmapped	-	1445	1467	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1496	1518	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1549	1571	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	1640	1661	InterPro	Parallel beta-helix repeat	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AXH66313.1

1 2111 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	914	914	0,6554
Central domain	915	1730	817	0,8529
C-terminal	1731	2111	380	0,8322

Note: Constraints were applied during segmentation.
Fixed 163 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Streptomyces phage Satis [NCBI] · taxon 2283264

No lineage information

Host No host information

Genbank protein accession

AXH66313.1 [NCBI]

Genbank nucleotide accession

MH576962.1 [NCBI]

CDS location

range 94356 -> 100691
strand -

CDS

ATGCCGCTGCCGCCCGAGCGTGTCGTCACGGGTACCTACGTCAACCCGGTCAACGGCGAGCCGTACGACGGCTCGAATGGCGACCACTACCTGATTTTCGAGCCCGTCCCCGACCGCTGGACCGATCGGGCCGGAAACCAGATTCTCCTCGGCGGCGGAAAGGTCACCCTCGACGAGAACGGACACTTCTCGGAAGACCTCGTCTGCACGGACGCGGCCGACGTGTACCCCGTGGAAGGCCGTCTGTGGCGCGTGCGTCAGTTCGTGGGCGGCTCCTGGGATTCCGGCACTTTCGCCCTGCCTGAAGGCGACGATCCGCTCGACATCACCGACATCCTCTCGGTGGACATTTGCGGCGTGGACTACGTCCCCGTGCCGGGTCCCCCCGGGCCGCAGGGTCCTCCCGGGCCGCCCGACGGCCCGCCTGGGCCGCCCGGACCCGAAGGTGCATCCGCCTACGAAGTGGCGGTCGAGCAGGGATTCTCCGGCACCGAGGACGAGTGGCTGGCCAGCCTCCAGGGGGAACAGGGTGAGCCCGGCGCGACCGGCGGCCCCGGCCCGCAGGGTGAGCCCGGCACGCCTGGCGAGGACGGCCCCTCCGCCTATCAGGTGGCCCTCGACAACGGGTTCGTCGGCACCGAGGCGCAGTGGCTCGCTTCACTCCAGGGACCGGCCGGTACGGACGGGGCGCCGGGCCCCGAAGGTGACTCGGCGTACGAAGTCGCCGTGGAGAACGGCTTCGAGGGCTCCGAGGCGCAGTGGCTGATCTCCCTCCGAGGCGCCCCCGGTGCCCCGGGCGACACCGGGCCGCAGGGTGAACCCGGTCCGGAGGGTCCTTCGGCCTACGAGGTGGCGGTCTCCGGAGGCTTCTCCGGTACGGAGGCGGAATGGCTCGCCTCTCTCGTGGGGCCCGAAGGTGACACCGGAGCCACCGGGGCCACCGGTCCTGCTGGCGATTCCGCCTACCAGGTCGCCCTCGACGAAGGCTTCGTGGGAACCGAGGAGGAGTGGCTTGCCTCGCTCGTGGGACCCCAGGGTCCCGCCGGTCGCGACGGCGGCATGGACACCGGCATCAGCCTCGGCGGAGACATCACCGCCAGCGAGACCGACCCGCTCGCAGTGGTCATCAACCCTCTCACGGGTCGCATCGTCGACTACTTCGCCGACCCGGTCACCATCACCGACGTCGAGGTGACCTCGCCCATCACGGTGACTCTCGACTCGGTGGCGCAGGAGCGCACGATCACCTGGCTCCTGATGGACGCGGACCAGATCGTCTACCAGCAGCAGGCCCGCCCCTCACCCGAGGACCGCCGGTCCTTCCTGGTGCTCGGCATGGTCGCCCAGGACGACGGCGAGATCTTCCTCGCGCAGTCGATCCCCACCATCGCGCGCCAGCCGGTGAACCAGCTCTACGACCTGATGGACGCCATCGGCGCCTTCGGCATCATGGGCAACGACGTGAGCCCGAACGGGGCGAACCTCCAGCTCAACGTCGGGGCCGGTCAGGTCTTCTCGCGCGGCTGGAATCACTTCGACGGCGGCACGGAAACCATCAACCCCCACATCGTCACCACCCTGGGCGCCACGCCTGCGTCCTGGACGCACGCCCTTCGGTCATCGGACCTGGAGCACGCCTCTGCCTCGACGACCGTGGACGTAGGGCACTACGACTTGAACGGCACGCTCACAGCCGTCGGCGGGGACACGGACACCTCCGTGGTGCACCAGCTCTGGATGTTCCCGACCAACGAGGGCTCGGAAGTTCACATCCTCCAGTACGGCCAGCAGCTTTTCGACACCCTCGAAGACGCCATCTCGGGCGCGGGCACCGCCGCCTTCGTGACGAACACGGCCCTGCCCGGCAACGCCATCATGCTCGGATACCTCGCGGTGCGGGGGGTGGCCACCGATCTCTCCGACGCCGCACAGGCCATGTTCATCAAGGCGGGCAAGTTCGGGGCGAGCCCCGGCGGCGGCGCCTCTGTGGACCTGAGCGGTTACGCCATGCTGGCGGGCGCCGAGTTCACGGGCCAGATCGCCACGAACATGGCGCAGCCGGACGCCGTCGCGCAGTCCTCGCGCGTCACGACGAACGGCTCGGACTCCTGGCGCAGGCAGGTCGACGGCGAGATGCAGTGGGGCCCCGGTGACGGCCCCATGGATGCGTTTCTGCGGCGCCTCGGCATCGGGATGCTCGCCTTCCTCAACACCGACCTGCTCGTGGGCCAGGAGGATGCGAAGTCGTACCGTTTCCGCCAGTCCGGTACCAGCCTGGATCTGGACGCCTCCGGCGCCGACCTGTTCCTGTCGGTGTTCGAGCTGGTCAACTTCCTCGGCGAGCAGTACACGTACCTCCGGCTGGAGTCCGGCGAGTTCACGGCGCACGCCTCCGGTAAGTGGGTCTTCGGCGACGGCCCGTTCGACGGGGCCGGGCACACGCTGGACGGCACCGCGAACCAGGCTGGCTTCTTCGGTGCGACGCCCGTGGGCCAGCAGACGGTGTCGGGTGCCCGAACCACTGGAGCGGGCCTCCAGAGCCTGCTGGACGCCCTCGAAGCACTCGGTCTGATCGTGGACTCCACGACCGCCGGAGTGGCCGTCGTGGAAACCGTCAACGGCCAGGCCGGGCCCGACGTGAGTCTCACCGCCTCCGACGTGGGCGTGGGCGACGTCATCGTGGCGGCGAACGACTCGCGCAACAAGGACGGCGCCGACTTCGTCTGCACGGGCACCAACGACCACCTCGTGATCCAGCAGGCGATCGATCTGGTGGACGCGGCGCCCGGCAAGGGAACGGTCCGGCTGCTCGACGGCACCTTCTGGCTGGGCGCGACCGTCACCATCCCGAGCGGCGCCGGTCTGAACCTGACGGGCACCGGGTGGGGCACCGTCCTGAAGATCTCCCCCGGGGTCGAGGACTACGCGATCACCTTCGACGGGGACGAGACGCGGGCGCGGTTCTCCCACTTCCGGATCGACGGAAACCTGAGCGGCCAGACGGCGGGTCCCTGCGGAGGCATCTGGGCAGCCGGGGCCGTCGAGTGCGTCTTCCAGCACATCAACTTCTCACACTGCTGGAGCGCCGGGCTGGTCCTCACCGCCATCAACGGTGGAGCCTTCGGCCACAACAACTACGTCCTGCACTGCCTGTTCGACAACGGCATGACCAGCACCGAAGAAGGCAACGGGATCTACCTCTCGTCCAGCGACGAGAACTTCATCGTCGCCTGCGACTTCCAGTTCCTGGGCGGCGCCTTCGGTGCGGGCGGCGCGGGCATTTACGACCAGGCGGGCACGCAGACCATCCTGGGCTGCAACTTCGTCGGTGGCGGCAACAGCCTTCCGGCGATCCGCGTGCAGGACGCCTCGGCCACGAAGATCACAGCCTGCAACTTCGACGGAGTCGGGGGCGACGCGGTCTTCCTGGCTGCGACGAACTGCCTGGTCGAGGGCAACACCATCTTCGGTGTCGGCGCCATCGGCACGGCGGGCACCTTCTCCGGGATTCACCTGGAGTACGGAGCGACCGGCAATCTCATCGCCAACAACTCGATCTCCTCCCACACCGTGAACGGCGCCGCACGCTCTCTCATCCGAGAGGAGTCGGTCGGCGATTCAGGCAACAACCTCGTCGTGGGCAACATGCTCATCACGAAGGGAACGCTGTCGGTCGGGGCGCTCGACCTCAACGCACCCGGCACCATCGCCCGGTCCAACTTCGGCGGCGGCGCGGACGGTGACCCGGTCGTCACCACGGACATGATCGGCGTAGCCGACGGCGTGGCCTCCCTCGACGCCACGGGCAAGGTGCCCGCCGCGCAGATGCCCGACGGGCTGGTCACCTCGGTCAACGGCGAGGACGGGGATGTCACTCTTACCGCAGCGGACGTGGGTGCGCTCGACGAAGCGGCGGGCGACGCGCGGTACACTCAGCAGGACGCGCTCTACCTGAACGCGAAGGAGCATGGGGCGGTCGGCGACGAGACGACGGACGACTCGACCGTCATCAACGCGCTGCTCTCCACGTCCCCGGCGGGCAGCACCGTGGTCCTGCCGCCCGGCACCTATGGCATCAGCGTGCCGCTCGTGGTTCCGCCGGGGAAGACCCTCATGGGCCTGCGCACGAACCTGATGCAGATCACCGACGTCTATGATCCGCAGGTCAGCATCAAGCCGCTCGCTGGCTTCACGGGCGTCGCGGCGGTGCGCTTCCTGGACCAGGCGACCGGTGGCTACGACGACATCTCCGGCGAGCAGCGGCTGATCGACATCATGCTCGACGGCTCCGCGCTCACCGCAGGAGTCGACGGACTCCAGGCCAAGGGCAACATCCAGAACGTCGGATTGCGCGATGTGACGATCCGGTTCTTCCCGAACTCCGGAATCTACTCCGGACTGGAGGGCGGCATCGGCCCGTACTCCTGGCGGATGCACCGGGTGATGCTCGACAACAACCACGCCCACGGCATGTACGCCGAGAAGATGGTCGACCTGACGATGGTCGACTGCCAGGCCATCGGCAACTGGTCCAACGGCTTCATGCTGAACAACGCGGCGAACTCCCAGGCGGTCGCCTGCCGCGCGGAGTGGAGCGGCAACCACGGCTTCTACCTCACGGGCGACTGGGGCGACGGCCAGGGCTCCGGCGGGATGCTCCTCTCGGCCTGCTCCACCGACCGCAACGGCTTCAACGGCGTCTTCATCGACTCCACCGGCAACGCGCCCATCGTCATCTCGAACCTGATGACGCGCCGCGACGGACGCAACGGAGGAACGGGCGGCGGCGGTTACGCCGGTCTCGCAGTGAACGCCGCCGAGATGCCGGTCATCGTCGGCGACTGGACGAACTACCCCGGGGTGGACGACAACGGCGCCTCGACCAGCAGTCCCGACTACGGGGCCTCCGTCACCGGCAGCACGCACGTGCAGATCGACAACGCCTACCTGCACGCCGCCACCGCCGGGCTCAACGATGGCGGCGGCAACACGGCCCTGATCCTGGGCGCGAACATCACGTACGCCACGGGCGCGACGACGGCTCCGGTGCGCGCGGTGCAGCAGCTCGCGGCGGCCCGCATCCCCGATCTCGCCGCATCCAAAGTGACCTCGGGAACCTTCGACGCCGCGCGCATCCCGGATCTGGCAGCCTCGAAGGTCACGTCGGGCACGTTCGACGCGGCCCGGATCCCGGCCCTGAACTACGTGCCCACCGGCTCGGCCGTTCTCCTCACGGGAGCGCAGACGGTCGGCGGACTGAAGACCTTCAGCTCCGGGCTCGCAGTGAAGGACGGCACCAACGCGGGCGACGTGCATATCAAGGACTCGCAGGACGTGAACCTGCTGGTCGTGGAGTCGAGCAACGCCACGGCCGCCGCCGGAGTCATGAAGCTCATCGCCGGGCAGGCCAGTCAGGCTGCCTTCCTCGGAACCTGGATGGGTGCGGCGACCAACGCCTGGTCGATCCGCGCCGACGGCCGTCTCGAAGCCGGTGACGGCGCTACCGGACGTGACACCTACCTGACCCGCACGGCAGCCGGAGTATGGCAGGTCACCAGCCAGATCAGGGCCAGCGCGTCGGCCCCCGCGAACGCGGCGGACCTCACGCGCAAGGACTACGTGGACGGCCTCGACACGGCGAACGTGAAGCTCACGGGCGCGCAGACCGTAGCGGGCATCAAGACCTTCAGCTCGATTCCCGTGGGTCCCGCCTCGAATCCGACCACCGACAGCCAGCTCGCCCGCAAGGCGTACGTGGATCAGATGGAGCCGAACGGGTTCGCTCCCGACGACATCGGCCTGCTGGCCTGGTCCTCCGACCCGGCCTGCTGTGTCTCGACTCCCGCCTTCTGTGGTGTGGGCGTGATGCGCATGACGGCGGTCGTGCTGCACACCGCGCAGACTGTGGGGAAGATCGTCTGGTACGCGGGCGGGTATGCGGGTGGTCTGCTCTCGGGATCCTGGGCGGGCATCTGGAATGCGGCCGGAACCACCCGGCTGGCTGGCGTGGCGGCCATGCACACGGGTGCCAGTGAACCCGCCGAGGTCCACAACGCGGGCGGTGCGATGCACTACGCACCGCTGGACGGCGGATCGGTCTCCCTGGCGGCCGGGGTCTACCTGGTGGCCTGGCGGCACGTCTACACGGCCTCCCCTGCCGACGGGCCGATGATCCTCCAGTACGAGAACGCGGCCGGATCCCCGCCGAACACCCTCGCACTGAACACGGTGAAGCGGTTCGGGTACATCACCTCCGGCGCGTCCACCCTCCCGAGCAGCATCTCGGGCGTGCTCACCGACGGTGGCAACCGCTTCTGGGTGGGCCTGGCCACCTGA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)