Protein

View in Explore
Genbank accession
YP_009802356.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPLVTQTIKNLKGGISQQPDILRFPDQGETQVNAFSSEVEGLQKRPPSVHIKLLTDNYADKPLVRLINRDETERYYMLFPGSRGGPTGTTPRVWDLEGRPVSVETPHGGNYMLTTEPRDDLRLVTVADYTFVINRKVTVKALGDVTNPGYRKDGRCIINIKGGQYGRTYKVLVNSQSIATFKTPDGSEKEHAEKIDTQFITKELATQCATTLGSTWTVTTGPNWVMLAAPVGTPISALVTEDGFNNGLMTGVIFECQRFNMLPAQAPDGYIVNVTGDPGSGADDYFIKYDARKLVWVETVAPGIIHKLDPATMPHAMVRRADGVFELRQLSWQSRPSGDNDSSPMPSFVDNTINDVFFFRNRLGLLSGENVILSGSGKFFDFFPKSVVATGDSDPIDVAVSHTRVSTLNHAVPFAEELLLWSDQTQFVLRADGVLSSKSVKVDQSTEFESAIHARPVAAGRGVYFAAPRASFSSIRRYYAVQDVSAVKNAEDVTSHVPSYVPNGVFHLGSSTTENIVVVLTAGAPNKLFLYKYLYMDEQLAQQSWSHWDFGRGVRVFGAEMVGSKMYLMLSTEAGLYLESIEFTQNTKDVDYEPYRTYVDRKARLLGLTYTPDDNTTRASLAAVYGTIPAYGSYWVIDDLGRCLKFDPPQNGWHNQGGILEMPGDWSARTLVVGEAYTFTYQFSKFLIKVQDQMGIRSEDTGRLQIRRAWVNHNNSGAFTVTVCGKYTYTMTGKHMGDYVIGSPANDTDQFRFPIMANVDRCAVIVSSDNPTPLALIGGGWIGNYYKREQAI
Physico‐chemical
properties
protein length:792 AA
molecular weight: 87793,11730 Da
isoelectric point:6,01904
aromaticity:0,10480
hydropathy:-0,26970

Domains

View on InterPro
Domain architecture
YP_009802356.1
1 792 aa
TTP 1–792
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009802356.1
1 792 aa
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9755
Central domain 145 351 208 0,2864
C-terminal 352 792 440 0,2435
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Ralstonia phage RPSC1 [NCBI] · taxon 2041351
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Ralstonia solanacearum [NCBI] · taxon 305
cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Coding sequence (CDS)

Genbank protein accession
YP_009802356.1 [NCBI]
Genbank nucleotide accession
NC_047982 [NCBI]
CDS location
range 526 -> 2904
strand +
CDS
ATGCCACTCGTCACGCAAACCATCAAGAACCTCAAGGGCGGCATCTCGCAGCAGCCCGACATTCTCCGCTTCCCCGATCAAGGCGAGACCCAGGTCAATGCCTTCTCGTCCGAGGTCGAAGGCCTACAGAAGCGCCCGCCATCGGTCCACATCAAGCTCCTCACGGACAACTACGCGGACAAGCCCCTGGTGCGCCTCATCAACCGGGACGAGACCGAGCGCTATTACATGCTGTTCCCCGGCTCCCGAGGTGGACCAACGGGGACAACCCCACGAGTGTGGGACCTGGAGGGCCGCCCGGTGTCCGTGGAGACCCCCCACGGGGGCAACTACATGCTGACCACCGAACCCCGCGATGACCTCCGCCTGGTCACCGTGGCCGACTACACCTTCGTGATTAACCGCAAGGTGACCGTCAAGGCCCTGGGCGATGTCACCAACCCAGGCTACCGCAAGGACGGCCGATGCATCATCAACATCAAGGGCGGCCAGTATGGGCGCACCTACAAGGTACTGGTCAACAGCCAGAGTATCGCCACCTTCAAGACCCCAGACGGGTCCGAGAAAGAGCATGCCGAGAAGATCGACACCCAATTCATCACCAAGGAACTCGCTACCCAGTGCGCCACTACCCTGGGGAGTACCTGGACGGTCACGACTGGACCCAACTGGGTCATGCTGGCGGCCCCCGTGGGGACTCCCATCTCGGCCCTGGTGACCGAGGACGGATTCAACAACGGCCTCATGACTGGCGTCATCTTCGAGTGCCAGCGATTCAACATGCTGCCAGCCCAGGCACCAGACGGCTACATCGTCAACGTGACCGGCGACCCAGGCAGCGGGGCGGACGACTACTTCATCAAGTACGATGCCCGCAAGCTGGTGTGGGTGGAGACGGTGGCCCCAGGTATCATCCACAAGCTGGACCCAGCCACGATGCCCCACGCCATGGTCCGCCGTGCCGATGGTGTATTCGAGCTTCGCCAACTGTCCTGGCAGTCCCGCCCCTCGGGTGACAATGACAGTTCCCCGATGCCGTCCTTCGTGGACAACACGATCAACGACGTGTTCTTCTTCAGGAACCGACTTGGCCTGCTCAGCGGCGAGAACGTCATCCTCTCCGGCTCCGGCAAGTTCTTCGACTTCTTTCCTAAGTCGGTGGTGGCCACGGGTGACAGTGACCCGATTGACGTGGCCGTGAGTCACACGCGGGTATCCACCTTGAACCACGCGGTTCCCTTCGCGGAGGAGCTTCTGCTGTGGTCCGATCAGACCCAGTTCGTCCTCAGGGCGGATGGCGTCCTGTCAAGCAAGTCCGTCAAGGTTGACCAGTCCACCGAGTTCGAGTCGGCAATCCACGCGAGGCCCGTAGCGGCTGGCCGTGGGGTGTACTTCGCGGCCCCTCGGGCGTCCTTCTCGTCTATCCGCCGCTACTACGCGGTCCAGGACGTGAGCGCCGTCAAGAATGCCGAGGACGTTACCAGCCACGTTCCCTCGTATGTCCCCAATGGGGTCTTCCACCTGGGTTCCTCCACCACGGAGAACATCGTGGTAGTCCTCACGGCCGGAGCGCCTAACAAGCTGTTCCTGTACAAGTACCTCTACATGGATGAGCAACTGGCTCAGCAATCCTGGTCTCATTGGGACTTCGGCCGGGGGGTGCGAGTGTTTGGTGCCGAGATGGTCGGCTCGAAGATGTACCTGATGTTGTCCACTGAGGCAGGCCTCTACCTGGAGTCCATCGAGTTTACCCAGAACACGAAGGACGTGGACTATGAGCCGTACCGGACCTACGTGGACCGCAAGGCGCGTCTCCTGGGCCTGACGTACACCCCAGACGACAACACGACCAGGGCCTCCCTGGCGGCCGTCTACGGGACTATCCCGGCGTATGGCTCCTACTGGGTCATTGACGACCTGGGCCGCTGCCTGAAGTTCGACCCTCCGCAAAACGGCTGGCATAACCAAGGCGGTATCCTGGAGATGCCTGGGGACTGGTCCGCCCGGACCCTCGTGGTGGGTGAGGCCTACACCTTTACCTACCAGTTCTCCAAGTTCCTCATCAAGGTCCAGGACCAGATGGGCATCCGCAGCGAGGACACGGGCCGCCTGCAAATCCGCAGGGCCTGGGTGAATCACAACAACAGCGGGGCTTTCACCGTGACCGTGTGCGGCAAGTACACCTACACGATGACCGGCAAGCACATGGGCGACTATGTGATCGGCTCCCCAGCGAACGACACCGACCAGTTCCGGTTCCCTATCATGGCGAACGTGGACCGCTGCGCCGTGATCGTTTCCTCCGACAACCCTACCCCACTGGCTCTCATCGGTGGCGGCTGGATCGGCAACTACTACAAGCGCGAACAAGCGATTTAA

Genome Context

Tertiary structure

YP_009802356.1
ESMFold structure
Source ESMFold
pLDDT 89.3
Oligomeric state monomer
Download structure