Protein

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Genbank accession
YP_009604496.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNPTLITTPFAENGDKNVIPESVGANPQNATMQAGFPPITQQKISEGGIPPERNDFNGILNLYGQHIVHLNKGLPYEFDQAFADAIGGYPLNARVMLDNGDIVRSTIANNTVNPNSDMTGWVKVNSASQIIESSGLTQQQFNDVITNKEIYLSRLGAKFDGSDETAILQSAVDMADELTTIVFDKTGFKFSSVNYGTKSVSMRGVFTNNPRRIPIVVYITGAGIVGSGQVIRLDSLDFRSTGNKNDGANITLMDNPHTDGTFLSVTNCAARNFSGVVFGFKDLIDSKISGFVPERNNLVFKFTLGTWVASTTITLEKVYAQMNTQVFDADRCGNSTMLDCIYEFNDSLGHINDGSWTIINYYGEGNSAPLVATNTNLTILRQYVLRGANDGFLNTFTTTDPYRIGSTLISGREISTFKFVKEYETYRQINPSFGSDTWTKIGNMRLETAGSCIITIIGANGYGTTTGAATEGTSRSVIICHKRSAGNGIPPIAATWHTVGNAPPISDVRIVDTQTSAGLEVYVLQKAYGYMGVAVDVFKAELFKYDIKTSQPKPTGGGSGDVNTPTMYIVPQYVKISAGTAYVGSDGTNPLLGGSTATTIGAAGSAAALPANPLGYIVVSINGTPRKIPYYNI
Physico‐chemical
properties
protein length:634 AA
molecular weight: 68090,74910 Da
isoelectric point:5,53336
aromaticity:0,09148
hydropathy:-0,13375

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009604496.1
1 634
Domain Start End Length (AA) Confidence
N-terminal 1 166 166 0,9941
Central domain 167 415 250 0,9906
C-terminal 416 634 218 0,9831
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-166
Central
167-415
C-terminal
416-634

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage WCHABP1
[NCBI] 		1983409 Uroviricota > Caudoviricetes > Obolenskvirus >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009604496.1 [NCBI]
Genbank nucleotide accession
NC_041966.1 [NCBI]
CDS location
range 2148 -> 4052
strand -
CDS
ATGACCAATCCAACACTTATTACAACCCCCTTCGCTGAAAATGGCGATAAAAATGTTATTCCAGAATCAGTTGGCGCTAATCCACAAAATGCAACCATGCAAGCTGGATTCCCGCCAATTACCCAACAAAAGATTTCTGAGGGTGGTATTCCTCCTGAGCGAAATGATTTTAATGGAATTCTAAATTTATATGGTCAGCACATTGTTCACCTAAATAAGGGCTTGCCTTATGAATTTGATCAAGCATTTGCCGATGCGATTGGTGGTTATCCATTAAATGCGCGTGTGATGCTTGATAACGGGGATATTGTTCGCTCTACCATTGCGAATAATACAGTCAATCCAAATAGTGATATGACGGGATGGGTGAAAGTTAACAGTGCAAGTCAAATTATTGAGTCAAGTGGACTAACACAGCAACAATTCAATGATGTAATTACAAACAAGGAAATCTATCTAAGTCGGTTGGGTGCAAAGTTTGATGGTTCTGATGAAACAGCGATTTTACAAAGCGCCGTAGATATGGCAGACGAGTTAACTACTATTGTTTTTGATAAAACTGGATTTAAGTTTAGTTCCGTAAATTACGGCACGAAGTCCGTGAGTATGCGTGGTGTATTTACCAACAACCCTAGACGAATCCCTATAGTGGTTTATATTACTGGCGCTGGCATTGTTGGCTCTGGTCAAGTTATTCGATTAGATTCTCTTGACTTCCGATCTACTGGTAATAAGAACGATGGTGCTAACATCACTCTCATGGACAATCCTCATACAGATGGAACATTCCTTTCTGTAACAAACTGTGCAGCTAGAAATTTTAGCGGTGTGGTTTTTGGATTTAAGGATTTAATTGACTCTAAAATCAGTGGATTTGTTCCCGAAAGAAACAATCTAGTATTTAAATTTACACTCGGTACTTGGGTGGCTAGTACAACAATTACATTAGAGAAAGTTTATGCACAGATGAACACTCAAGTGTTTGATGCTGATAGGTGTGGTAACAGCACAATGCTAGACTGTATTTATGAGTTTAACGATAGTCTTGGTCACATAAATGATGGTAGCTGGACCATTATAAACTATTACGGTGAGGGTAATTCTGCACCGCTTGTAGCGACTAATACGAATTTAACGATTTTAAGACAGTACGTTCTCCGTGGTGCAAATGACGGATTTTTAAATACCTTTACAACCACTGACCCGTATAGAATTGGTAGCACCCTCATATCTGGGCGAGAGATATCTACATTTAAATTCGTAAAAGAATATGAAACATATAGACAAATTAACCCCTCATTCGGAAGTGACACATGGACTAAAATCGGGAATATGCGTCTTGAGACAGCAGGTTCTTGTATTATTACTATCATTGGCGCAAACGGGTATGGAACAACCACTGGCGCTGCGACAGAGGGTACAAGTAGGTCTGTAATTATCTGCCACAAACGATCTGCTGGAAATGGAATTCCTCCGATTGCTGCTACTTGGCATACAGTTGGAAACGCTCCACCGATTTCAGACGTTCGCATAGTAGACACGCAGACCAGCGCAGGTCTTGAGGTTTATGTGTTGCAAAAAGCTTACGGCTACATGGGTGTGGCAGTTGATGTATTCAAAGCAGAGCTATTTAAGTATGACATTAAAACATCACAACCAAAACCAACGGGCGGAGGTTCTGGTGATGTTAATACGCCAACAATGTATATTGTTCCACAGTATGTAAAAATCAGTGCTGGAACAGCCTACGTGGGCTCTGATGGCACAAACCCATTATTAGGTGGATCAACTGCAACCACTATTGGTGCAGCAGGTAGTGCAGCAGCACTTCCTGCAAACCCTCTTGGATACATTGTTGTCAGCATTAACGGTACTCCTCGTAAGATTCCGTACTACAATATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c296b1d7313b8bed3cc901205601c4c99c68334ce9ad9888bab99659de211633
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6974
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Acinetobacter baumannii phage WCHABP1 Zhou,W., Feng,Y. and Zong,Z. 2013-06-24 — GenBank