Protein

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Genbank accession
YP_009604496.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,92
Seq2Symm
C3 confidence 1,000
C3 1,000
C1 0,002
D3 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTNPTLITTPFAENGDKNVIPESVGANPQNATMQAGFPPITQQKISEGGIPPERNDFNGILNLYGQHIVHLNKGLPYEFDQAFADAIGGYPLNARVMLDNGDIVRSTIANNTVNPNSDMTGWVKVNSASQIIESSGLTQQQFNDVITNKEIYLSRLGAKFDGSDETAILQSAVDMADELTTIVFDKTGFKFSSVNYGTKSVSMRGVFTNNPRRIPIVVYITGAGIVGSGQVIRLDSLDFRSTGNKNDGANITLMDNPHTDGTFLSVTNCAARNFSGVVFGFKDLIDSKISGFVPERNNLVFKFTLGTWVASTTITLEKVYAQMNTQVFDADRCGNSTMLDCIYEFNDSLGHINDGSWTIINYYGEGNSAPLVATNTNLTILRQYVLRGANDGFLNTFTTTDPYRIGSTLISGREISTFKFVKEYETYRQINPSFGSDTWTKIGNMRLETAGSCIITIIGANGYGTTTGAATEGTSRSVIICHKRSAGNGIPPIAATWHTVGNAPPISDVRIVDTQTSAGLEVYVLQKAYGYMGVAVDVFKAELFKYDIKTSQPKPTGGGSGDVNTPTMYIVPQYVKISAGTAYVGSDGTNPLLGGSTATTIGAAGSAAALPANPLGYIVVSINGTPRKIPYYNI
Physico‐chemical
properties
protein length:634 AA
molecular weight: 68090,74910 Da
isoelectric point:5,53336
aromaticity:0,09148
hydropathy:-0,13375

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009604496.1
1 634 aa
Domain Start End Length (AA) Confidence
N-terminal 1 166 166 0,9941
Central domain 167 415 250 0,9906
C-terminal 416 634 218 0,9831
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Acinetobacter phage WCHABP1 [NCBI] · taxon 1983409
Uroviricota Caudoviricetes Hirszfeldviridae Sichuanvirus Sichuanvirus WCHABP1
Host
Acinetobacter baumannii [NCBI] · taxon 470
Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter baumannii

Coding sequence (CDS)

Genbank protein accession
YP_009604496.1 [NCBI]
Genbank nucleotide accession
NC_041966.1 [NCBI]
CDS location
range 2148 -> 4052
strand -
CDS
ATGACCAATCCAACACTTATTACAACCCCCTTCGCTGAAAATGGCGATAAAAATGTTATTCCAGAATCAGTTGGCGCTAATCCACAAAATGCAACCATGCAAGCTGGATTCCCGCCAATTACCCAACAAAAGATTTCTGAGGGTGGTATTCCTCCTGAGCGAAATGATTTTAATGGAATTCTAAATTTATATGGTCAGCACATTGTTCACCTAAATAAGGGCTTGCCTTATGAATTTGATCAAGCATTTGCCGATGCGATTGGTGGTTATCCATTAAATGCGCGTGTGATGCTTGATAACGGGGATATTGTTCGCTCTACCATTGCGAATAATACAGTCAATCCAAATAGTGATATGACGGGATGGGTGAAAGTTAACAGTGCAAGTCAAATTATTGAGTCAAGTGGACTAACACAGCAACAATTCAATGATGTAATTACAAACAAGGAAATCTATCTAAGTCGGTTGGGTGCAAAGTTTGATGGTTCTGATGAAACAGCGATTTTACAAAGCGCCGTAGATATGGCAGACGAGTTAACTACTATTGTTTTTGATAAAACTGGATTTAAGTTTAGTTCCGTAAATTACGGCACGAAGTCCGTGAGTATGCGTGGTGTATTTACCAACAACCCTAGACGAATCCCTATAGTGGTTTATATTACTGGCGCTGGCATTGTTGGCTCTGGTCAAGTTATTCGATTAGATTCTCTTGACTTCCGATCTACTGGTAATAAGAACGATGGTGCTAACATCACTCTCATGGACAATCCTCATACAGATGGAACATTCCTTTCTGTAACAAACTGTGCAGCTAGAAATTTTAGCGGTGTGGTTTTTGGATTTAAGGATTTAATTGACTCTAAAATCAGTGGATTTGTTCCCGAAAGAAACAATCTAGTATTTAAATTTACACTCGGTACTTGGGTGGCTAGTACAACAATTACATTAGAGAAAGTTTATGCACAGATGAACACTCAAGTGTTTGATGCTGATAGGTGTGGTAACAGCACAATGCTAGACTGTATTTATGAGTTTAACGATAGTCTTGGTCACATAAATGATGGTAGCTGGACCATTATAAACTATTACGGTGAGGGTAATTCTGCACCGCTTGTAGCGACTAATACGAATTTAACGATTTTAAGACAGTACGTTCTCCGTGGTGCAAATGACGGATTTTTAAATACCTTTACAACCACTGACCCGTATAGAATTGGTAGCACCCTCATATCTGGGCGAGAGATATCTACATTTAAATTCGTAAAAGAATATGAAACATATAGACAAATTAACCCCTCATTCGGAAGTGACACATGGACTAAAATCGGGAATATGCGTCTTGAGACAGCAGGTTCTTGTATTATTACTATCATTGGCGCAAACGGGTATGGAACAACCACTGGCGCTGCGACAGAGGGTACAAGTAGGTCTGTAATTATCTGCCACAAACGATCTGCTGGAAATGGAATTCCTCCGATTGCTGCTACTTGGCATACAGTTGGAAACGCTCCACCGATTTCAGACGTTCGCATAGTAGACACGCAGACCAGCGCAGGTCTTGAGGTTTATGTGTTGCAAAAAGCTTACGGCTACATGGGTGTGGCAGTTGATGTATTCAAAGCAGAGCTATTTAAGTATGACATTAAAACATCACAACCAAAACCAACGGGCGGAGGTTCTGGTGATGTTAATACGCCAACAATGTATATTGTTCCACAGTATGTAAAAATCAGTGCTGGAACAGCCTACGTGGGCTCTGATGGCACAAACCCATTATTAGGTGGATCAACTGCAACCACTATTGGTGCAGCAGGTAGTGCAGCAGCACTTCCTGCAAACCCTCTTGGATACATTGTTGTCAGCATTAACGGTACTCCTCGTAAGATTCCGTACTACAATATTTAA

Genome Context

Tertiary structure

YP_009604496.1
ESMFold structure
Source ESMFold
pLDDT 69.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The complete genome of Acinetobacter baumannii phage WCHABP1 Zhou,W., Feng,Y. and Zong,Z. 2013-06-24 — GenBank