Phage RBP Database

Genbank accession

QHB42070.1 [GenBank]

Protein name

tail spike protein

RBP type

TSP

Evidence DepoScope

Probability 0,99

TSP

Evidence GenBank

Probability 1,00

TSP

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,96

TSP

Evidence UniProt/TrEMBL

Probability 1,00

Protein sequence

MNSQFSQPKGSVSKETNKDSIARKFGCKKSEVLYAKAGVSLSGYKVIYDKNTERSYALPSDLPSDSVFISLTNAILTHNGGTVDLGALAVLRGEFVTVGGTFTVGGTLGVKNELLTHDDGKYRWGGTFPKIVPLGSSPEASGGISPTTWIKIYDPSLRENLFSSAGAGVIGSADGNVQNDLSTLKISTTKLNNHADLVIDDYLFSGETTYDNAIQRVLTESLSSGRPIKFLPHVYNFSSPVTLNMDAPGIKIYGAGVSRTELRFPNAAAGVTQLIIKSTADWYDFVWEGMSVRSSHAGILCQIGNTNFVDPLNVARLEDLAFLNSSSIGDNNVVALSLEYGVQCSLINVRANCYATGTGVNVGRALVVRQVGFTTYVSCSFGNASYGVSFLDGVSFTNNFIGCDFENINIALYNGVPTSGGHTFIGCQFSLWTQFLAQAPVGSTNRFLIINPNVSQVDGLVDPNNAVGVKFQNDQLDITTPGLPASGSSVTNTTGRVVVVTIGGGTVSAILRNGGTLGITNGTVILLPMDTITLVYSAGPSWSWYKLG

Physico‐chemical properties

protein length:	548 AA
molecular weight:	58091,77970 Da
isoelectric point:	5,90969
aromaticity:	0,09124
hydropathy:	0,06880

Domain architecture

QHB42070.1

1 548 aa

ATT 1–163 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:3.30.2020.50
ATT

G3DSA:3.30.2020.50 IPR040775

G3DSA:2.10.10.80
ATT

G3DSA:2.10.10.80

QHB42070.1

1548 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0071
STR

DC_0071

QHB42070.1

1548 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:3.30.2020.50	ATT	G3DSA:3.30.2020.50	1	93	Merged direct domain	G3DSA:3.30.2020.50	N-terminal	Low	Positional only	289 proteins / 289 hits
IPR040775	RBD	DC_0821	94	152	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	94	163	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QHB42070.1

1 548 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	211	211	0,9949
Central domain	212	466	256	0,9734
C-terminal	467	548	81	0,9781

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Dickeya phage Ds16CZ [NCBI] · taxon 2686431

Uroviricota Caudoviricetes Pantevenvirales Aglimvirinae Limestonevirus

Host

Dickeya solani [NCBI] · taxon 1089444

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)