Protein

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Genbank accession
XVB82453.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MTSFDNTYVLKLDIKEQQPNPVVRIVQFDSIFLNIELYDAGKKMELKNGERFTVSVEHEETGKKSTGMARYDGNQFVVYELRKADMDEIGTYKARFASYENRNRVTSLQFRYEVYEDLETVGDPNELTMLQELFNEVEEVGRVTQRQGEYAEDRGDYANAAGDYANTAGDSQIMNWVPYVKTLAERSEKYPNPENGYTVYVISENKVFRYDGIDALDWEAISGYDTSVIQDLYNTKEDKTTVKTITDAIKADLKALTIGGRNLISGTEFNEAWTFRSATTKYSIATNIGAKTLTIAPTTEYTSGSTYTFLLEKDIEKNSYVNLSFVAKPQASGGTLKFKIGNGTYSEAIALGNASDTYQTYTVSTTADHTSGGTAIYIEQTKGLLFRADSIKVEQGNRPTAWTPSYEDLYKRIKTVRDIVDSNVSRINALEVEMNTNVVKKSVYALDKTKNEERFSQIIQDASGLSSIVSKKVDGKIVKSMINQSAEKIKIKSSSIDFDGAVVFKNRNGSPDPNAYVKINGGELTSRGYYTRKWRDGKNRNRNQIIQMTDGMLRISDPQGDLIDNKVYGYDYVNDVRKDGTKVKNTYRSLYYTSDGISTFRDGSGKTFDPKGRVVSSGTIEFFSHAYSNGRGLTLYSAGGAIGLQASGNAIHIDAAATVYTRSRKADLRFRPQENVRNGKNEFQMSVSENNTGRIVYGDISKNLGVGFRMSKSSKDKTIWGIEPNGSASSKVTLNIGKIKSDTITTRNGKQSVYWNGSGGGTLSAKTALQADGVRTNATNFYIGVSGELRVTNKKGYNNGKTIGYLPVKASKFNSVSSRKYKSNIQELEIDTLDILKKTEIKQYNLNSDLDAGIKKTKYGVILEDTPEVLHEGDAIDIYGMVSILWDVVKKQQAHIEELNK
Physico‐chemical
properties
protein length:901 AA
molecular weight: 100398,98710 Da
isoelectric point:8,61841
aromaticity:0,09434
hydropathy:-0,59534

Domains

Domains [InterPro]
DC_1050
STR
44–540
DC_1050 DC_0203
IPR030392
CHP
817–901
IPR030392
IPR030392
CHP
817–872
IPR030392
XVB82453.1
1 901
Architecture
STR
RBD
STR 44-540 | RBD 775-901
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVB82453.1
1 901
Domain Start End Length (AA) Confidence
N-terminal 1 269 269 0,9945
Central domain 270 498 230 0,2727
C-terminal 499 901 402 0,6907
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-269
Central
270-498
C-terminal
499-901

Taxonomy

  Name Taxonomy ID Lineage
Phage Mammaliicoccus phage phi36
[NCBI] 		3414227 Viruses >
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB82453.1 [NCBI]
Genbank nucleotide accession
PV389078 [NCBI]
CDS location
range 34444 -> 37149
strand -
CDS
ATGACAAGTTTTGATAACACTTATGTTTTAAAGTTAGATATCAAAGAGCAACAACCAAACCCAGTAGTTAGAATAGTACAGTTTGACTCTATTTTCTTAAACATTGAGTTATATGATGCTGGAAAGAAAATGGAATTAAAGAACGGAGAGCGTTTTACAGTCAGTGTTGAACACGAAGAAACAGGTAAGAAAAGTACTGGTATGGCTAGATATGACGGTAATCAATTTGTTGTATATGAATTAAGAAAAGCAGATATGGATGAAATTGGTACATATAAAGCTAGGTTCGCTTCATATGAGAATAGAAATCGTGTAACTTCATTACAATTCAGATATGAGGTTTATGAAGATTTAGAAACAGTTGGAGACCCAAATGAGTTAACTATGCTTCAAGAGTTATTTAATGAAGTAGAAGAAGTCGGAAGAGTAACTCAACGTCAAGGTGAATATGCTGAAGACAGAGGAGATTACGCAAACGCAGCTGGCGACTATGCTAACACTGCTGGCGACTCACAAATTATGAATTGGGTTCCATATGTAAAAACTTTAGCTGAACGCAGTGAGAAGTACCCTAACCCAGAAAACGGATATACTGTTTATGTGATTAGTGAGAACAAAGTATTTAGATACGATGGAATTGATGCTTTAGATTGGGAAGCTATTTCTGGATATGATACTTCAGTTATTCAAGACTTATACAATACCAAAGAAGATAAAACAACTGTAAAAACAATCACTGATGCGATTAAAGCTGACCTAAAAGCATTAACTATTGGTGGTAGAAACTTAATTTCTGGCACAGAATTTAATGAAGCATGGACATTCAGAAGCGCTACAACTAAATACTCAATTGCTACAAATATAGGAGCTAAAACTTTAACTATTGCCCCTACTACTGAATACACTTCTGGTAGTACATATACGTTCTTATTAGAAAAAGATATTGAAAAAAATAGTTACGTTAATTTATCTTTTGTTGCTAAACCTCAAGCTAGTGGTGGTACATTAAAATTTAAAATTGGTAACGGTACTTATTCTGAAGCAATTGCTTTAGGTAACGCTTCTGACACATACCAAACATACACTGTATCTACTACAGCTGACCATACTTCTGGTGGTACTGCAATATACATTGAACAAACTAAAGGCTTATTATTTAGAGCTGATTCAATAAAAGTTGAACAAGGTAATCGACCTACAGCATGGACACCTTCTTATGAAGATTTATACAAACGTATTAAAACAGTAAGAGATATTGTTGATAGCAACGTTAGTCGCATTAATGCATTAGAAGTAGAGATGAATACAAATGTTGTAAAAAAATCTGTATATGCTTTAGACAAAACTAAAAATGAAGAAAGATTCTCTCAAATTATACAAGATGCTAGTGGGCTATCAAGTATAGTTAGTAAGAAAGTTGACGGTAAAATAGTTAAATCTATGATTAACCAATCTGCTGAGAAAATCAAAATCAAATCTTCAAGTATTGATTTCGATGGTGCTGTGGTATTCAAAAATAGAAATGGCTCCCCTGACCCTAATGCTTATGTAAAAATTAACGGTGGAGAGTTAACTTCAAGAGGGTATTATACACGTAAATGGCGTGACGGTAAGAACCGTAACAGAAACCAAATCATTCAAATGACTGACGGTATGTTAAGAATTTCTGACCCTCAAGGTGACTTGATTGATAATAAAGTCTACGGTTATGATTATGTAAATGATGTTAGAAAAGATGGTACAAAAGTTAAAAACACATATCGTTCTCTTTACTATACTTCAGATGGTATATCTACATTCCGAGATGGCTCAGGTAAAACTTTTGACCCTAAAGGTAGAGTAGTTTCATCTGGAACTATTGAGTTCTTCTCACATGCTTATTCTAATGGTCGTGGACTTACACTTTATTCGGCAGGAGGAGCAATTGGTTTACAAGCTTCTGGTAACGCTATACATATCGATGCTGCTGCCACTGTCTATACTCGCTCAAGAAAAGCCGATTTAAGATTTAGACCACAAGAGAATGTTCGTAATGGTAAGAATGAATTCCAGATGTCAGTATCTGAGAACAATACTGGTAGAATTGTTTATGGTGATATCAGTAAAAACTTAGGTGTAGGCTTCAGAATGAGTAAATCTTCTAAAGATAAAACTATCTGGGGTATTGAACCAAATGGTTCTGCTTCAAGTAAAGTAACACTTAATATCGGTAAAATTAAATCTGACACTATCACAACTAGAAACGGTAAACAATCAGTATACTGGAATGGTTCTGGTGGTGGCACATTATCTGCAAAAACAGCTTTACAAGCCGATGGTGTTAGAACAAACGCAACTAACTTCTACATTGGCGTATCAGGAGAGTTACGTGTAACAAATAAAAAAGGATACAACAACGGTAAAACTATTGGGTACTTACCTGTTAAAGCGAGTAAGTTTAACTCAGTATCAAGTAGAAAATACAAATCAAATATTCAAGAATTAGAAATTGATACATTAGATATCTTGAAGAAAACAGAAATCAAACAATACAACTTAAACAGTGATTTAGATGCTGGTATTAAGAAAACTAAGTACGGAGTAATCTTAGAAGATACTCCTGAAGTATTACATGAAGGTGATGCTATCGATATTTACGGTATGGTATCTATCTTATGGGATGTAGTTAAGAAACAACAAGCTCATATTGAAGAACTAAATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae0e143e145d83b46d910d45ad9576b0dbd0101d5838424a0d709c33015510c9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7486
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of phylogenetically distinct temperate phages from Kenyan Mammaliicoccus sciuri Cherbuin,J.D.R. 2025-12-01 — GenBank