Phage RBP Database

Genbank accession

XSD98507.1 [GenBank]

Protein name

central tail fiber J

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,85

Protein sequence

MRQILPSAKAYLANNDKIRLAYLVSIELPGSTGNNAVYAYMTDYMRDINYGGILFQSGKIKTISSHKQNRTLTVGSLSFSVTGTDANEVIKLVQSGVSFLDRSISIYQAIIDDNGEILPVDPDTNGPLLFFRGKIVGGGIKESNTVSGVGTSVITWNCSNEFYDFERVAGRFTDDASHRGLEIVNGELLPSHGAKRPEYQEDYGFFHANKSVNFLAKYQVKEERYKLESKKKLFGLSKSYSLKKYYETVTKEVDLDFNLAAKFIPVVYGTQKVPGIPVFADTERNNPNVVYVVYAFCEGEIEGFLDFQFGDAPMICTDQTDSTSRTCFGQKRVSGDTMARISTGLPSTSLSEHGQEYKYNDGNGDIRIWTFHGKPDQTVATVLRDIAAANNFFLQGENGNGPEYWDSRYKLLDTAYAVIRFTITENRTDIPEVSAELSGRKVKVYQADGSVKMDKTSQNGVWQTFDYLTSTVFGANIPVDRMVIGDWRKEADLLNIIDTSYQTSWQPFWRYVGWESWTAENRQIMQMNTILDNSNSVFKNVQELLESFQGALNNLSGIFRITVEKDSKTPLELNFLDTYGDLDLSDTTGRNKYNSVQASLIDPTLNWKTNSITFYNSKFKNEDRGVDKKLQLSFANITNYYTARSLADRELKKSRYSRSLSFSLPYKFLGIEPNDPVVFTYDRYGWNKKFFLVDEVENTRDGKINVTLQEYGEDVFINSTQVDNSSEAVPEISNNVLPPRDFKYTPTPGGMVGDVGKNGELSWLPSLTPNVVYYSIRKSDRVDPYIVQQTAFTPNVRMFQDIVGEPAGLTIFEIRAVDINGRRSSPVTISVDLNSAKNLSMVENFRVLNLAPDPAEWVGPDLELGWDKLQEEGLISGIFYTLEIRDNTNKLLRSAKITSLYNYSYLLGYNKLDYKANNSNTLGIYRALQPRIQAEGPKGEKSVAWAYI

Physico‐chemical properties

protein length:	948 AA
molecular weight:	106927,72400 Da
isoelectric point:	5,38859
aromaticity:	0,11603
hydropathy:	-0,41878

Domain architecture

XSD98507.1

1 948 aa

ATT 593–696 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR032876
ATT

IPR032876

XSD98507.1

1948 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0187
STR

DC_0187

XSD98507.1

1948 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR032876	ATT	DC_0307	593	696	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XSD98507.1

1 948 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	311	311	0,9354
Central domain	312	541	231	0,4282
C-terminal	542	948	406	0,0032

Note: Constraints were applied during segmentation.
Fixed 16 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Klebsiella phage vB_Kpn_K7_rec7 [NCBI] · taxon 3412965

Viruses

Host

Klebsiella pneumoniae [NCBI] · taxon 573

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

XSD98507.1 [NCBI]

Genbank nucleotide accession

PQ569733.1 [NCBI]

CDS location

range 17160 -> 20006
strand +

CDS

ATGAGACAGATCCTTCCTTCTGCGAAAGCCTACCTTGCCAACAATGACAAGATACGATTAGCGTATCTTGTCTCTATCGAACTCCCGGGGTCCACGGGTAATAACGCTGTTTATGCTTATATGACGGACTATATGAGAGATATCAACTATGGTGGTATACTCTTCCAATCAGGGAAAATTAAAACAATTAGCAGTCACAAACAAAACCGTACGTTAACCGTCGGTAGTTTGAGCTTCAGTGTTACCGGTACGGATGCCAATGAAGTCATTAAGCTCGTGCAAAGTGGTGTATCATTTTTAGATCGCTCTATTTCTATATACCAGGCGATCATCGACGACAATGGGGAAATCCTTCCTGTGGACCCAGATACTAACGGCCCCTTACTCTTCTTTAGAGGTAAGATTGTGGGTGGTGGTATTAAAGAAAGTAATACAGTATCCGGAGTTGGTACTTCTGTTATAACCTGGAACTGTTCTAACGAATTCTACGATTTTGAGCGAGTTGCTGGACGCTTCACAGATGATGCCTCCCACCGAGGGCTTGAGATTGTAAACGGAGAATTACTACCTTCCCACGGTGCCAAACGACCAGAATACCAAGAAGACTATGGATTCTTCCACGCCAACAAGAGCGTTAACTTCCTAGCTAAATATCAAGTAAAAGAAGAACGATACAAGCTAGAATCTAAGAAGAAATTATTTGGTCTATCCAAGAGCTACAGTCTTAAAAAGTATTATGAGACTGTCACTAAAGAAGTAGACCTGGACTTCAACCTTGCAGCCAAGTTTATTCCTGTAGTATATGGTACTCAAAAAGTTCCTGGTATCCCGGTTTTCGCGGATACAGAGAGAAACAATCCAAACGTTGTGTACGTGGTTTACGCGTTCTGTGAGGGTGAGATTGAAGGATTCCTAGACTTCCAGTTTGGGGACGCCCCTATGATCTGTACTGATCAAACTGACAGTACCTCTCGTACATGCTTTGGACAAAAAAGAGTATCGGGAGATACTATGGCAAGAATCTCCACAGGACTTCCATCAACATCTCTTTCAGAGCATGGTCAAGAATACAAGTACAATGATGGTAACGGGGATATACGAATCTGGACATTCCACGGTAAACCAGACCAGACGGTAGCTACGGTACTAAGAGACATTGCTGCTGCTAACAATTTCTTTCTTCAAGGGGAGAACGGTAATGGTCCGGAGTACTGGGATTCTAGATACAAGCTATTAGACACCGCATACGCTGTTATACGGTTTACTATTACCGAGAACAGGACCGATATTCCTGAAGTGTCCGCAGAATTAAGCGGCCGTAAGGTAAAAGTGTACCAGGCAGACGGTTCTGTTAAAATGGATAAAACGAGTCAGAATGGTGTATGGCAAACATTTGACTACCTAACTTCCACTGTCTTTGGGGCAAATATTCCTGTGGACAGAATGGTGATTGGTGACTGGAGAAAAGAGGCCGACCTATTAAACATTATAGACACCTCTTATCAAACTAGTTGGCAACCTTTCTGGAGATACGTTGGATGGGAGAGCTGGACAGCCGAAAACAGACAAATAATGCAAATGAACACAATCCTGGATAACTCCAACTCTGTGTTCAAAAACGTGCAGGAGCTATTAGAATCCTTCCAGGGGGCGTTGAATAACCTATCAGGTATCTTCCGCATCACCGTAGAGAAAGATTCAAAAACTCCGCTAGAACTTAATTTCCTAGATACTTATGGGGACCTGGATCTATCAGATACTACAGGCCGTAATAAGTACAACTCAGTTCAGGCATCTCTGATTGATCCTACCCTGAACTGGAAAACCAACTCTATAACGTTCTATAATTCTAAGTTTAAGAATGAAGATCGTGGAGTTGACAAGAAACTTCAACTTTCTTTTGCTAACATAACCAACTACTACACTGCTAGAAGCTTGGCAGATAGAGAGCTTAAGAAGTCTCGTTACTCTCGCTCTCTGAGTTTCTCTTTACCTTACAAATTCCTTGGTATAGAACCTAACGATCCTGTAGTATTCACCTACGATCGTTATGGCTGGAATAAGAAGTTCTTCCTAGTAGATGAGGTGGAGAACACAAGGGATGGTAAGATAAACGTAACTCTTCAGGAGTATGGTGAGGATGTATTTATTAACTCAACGCAGGTGGATAACAGTAGCGAGGCCGTTCCTGAAATATCCAATAACGTCCTGCCCCCAAGAGACTTTAAGTACACCCCTACACCAGGTGGAATGGTAGGTGATGTTGGCAAAAACGGAGAGCTTTCATGGCTTCCTAGCTTGACACCTAACGTAGTCTATTACTCGATACGTAAATCCGACCGCGTGGATCCTTATATTGTGCAGCAGACTGCTTTCACACCTAACGTTAGAATGTTCCAAGATATCGTGGGTGAGCCTGCTGGCCTGACTATTTTCGAGATCCGCGCCGTTGATATTAATGGTCGTCGTAGCTCTCCAGTAACAATTTCTGTAGATTTGAACTCAGCTAAAAACCTTAGTATGGTGGAAAACTTCCGAGTGCTTAACCTTGCCCCTGACCCTGCTGAATGGGTAGGACCTGACTTAGAGTTAGGGTGGGACAAGCTGCAAGAAGAGGGGCTGATTTCAGGGATTTTCTACACGCTTGAAATAAGGGACAACACTAATAAACTGCTTAGATCCGCGAAGATCACCAGTTTATATAACTACAGCTACCTGTTGGGCTATAATAAGCTCGACTACAAGGCCAACAACTCGAATACTTTGGGGATTTACAGAGCACTTCAGCCAAGAATTCAGGCGGAGGGACCAAAGGGCGAGAAGTCGGTTGCATGGGCATATATCTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)