Protein

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Genbank accession
QCW19929.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MANQDTDLRCYLTNAGIAAENNSIQLGRKLPVKEMVFGSGLLADESDPRLQTTMIQEEYTVPCGMLFDPESPTLLVFKGDLPADVGGFHINEVAIRLEDGTLYGYARGKGDYKPTIEQGATDSVRYAVEMYTTNASNVECKIDLSKVYVDWEDLEARIKAHTDDNAPHPQYATDDDLTQAKQQAKTDWSNLVAVSQFLPYDQGRKYKTGEICYTINQATGELAYWQWYSNVESLAGKWPLSEGNRHAGWSDNTKPFYWIPYTGDQVGMPFLWLAEEAPEWAVMEINVDLPTAVYWRLARRYPHLVSGGTINTGEIRGEFLRVLDQGRGVDAGRVLGSHQSDDFEAHYHPLTAVSGGAATSPSFPSAFASPYFSGNAAKQNDGSFANAGALTYGAAGQGAYQSPEQQKSSGNGIETRPRNIARSMAIVI
Physico‐chemical
properties
protein length:428 AA
molecular weight: 47103,73630 Da
isoelectric point:4,83691
aromaticity:0,10514
hydropathy:-0,45818

Domains

Domains [InterPro]
DC_0787
STR
1–425
DC_0787
IPR022225
ATT
8–148
IPR022225 SSF88874
QCW19929.1
1 428
Architecture
ATT
STR
ATT 1-148 | STR 149-425 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Va_PF430-3_p42
[NCBI] 		2565524 No lineage information
Host Vibrio anguillarum
[NCBI] 		55601 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW19929.1 [NCBI]
Genbank nucleotide accession
MK672805.1 [NCBI]
CDS location
range 35662 -> 36948
strand +
CDS
ATGGCTAATCAAGATACAGACTTGCGCTGCTATTTAACGAATGCAGGTATTGCAGCAGAAAACAACTCGATCCAACTAGGTCGAAAGCTACCCGTGAAAGAAATGGTGTTTGGTAGCGGGCTACTTGCTGATGAAAGTGACCCACGTTTGCAAACCACTATGATTCAAGAAGAGTATACCGTTCCATGCGGTATGCTGTTTGACCCTGAAAGCCCAACACTCTTGGTATTTAAAGGCGATCTACCCGCCGATGTGGGTGGTTTTCATATTAATGAAGTGGCGATCCGCTTAGAAGATGGCACACTTTATGGTTACGCTCGCGGAAAAGGGGATTACAAGCCAACCATAGAGCAAGGCGCTACCGATTCGGTTCGCTATGCCGTGGAAATGTACACTACCAATGCGAGCAATGTTGAGTGCAAAATTGATCTGTCAAAAGTGTATGTTGATTGGGAAGATTTGGAAGCGCGCATTAAAGCGCATACCGATGATAATGCTCCGCACCCCCAATATGCGACGGATGATGATTTAACCCAAGCAAAGCAACAAGCCAAAACAGATTGGTCGAATTTAGTCGCGGTAAGTCAGTTTTTACCTTATGACCAAGGTCGAAAATATAAAACGGGCGAAATTTGCTACACCATAAATCAAGCAACTGGTGAGTTAGCGTATTGGCAATGGTATTCCAATGTTGAGTCATTGGCTGGTAAGTGGCCGCTGTCAGAAGGGAATCGTCATGCTGGTTGGTCTGACAATACTAAGCCGTTTTATTGGATTCCCTACACAGGAGATCAGGTAGGTATGCCTTTTTTATGGCTTGCTGAAGAAGCACCAGAGTGGGCAGTGATGGAGATCAATGTTGATTTACCTACAGCAGTTTATTGGCGTTTAGCTCGTCGTTATCCGCATTTAGTTAGTGGTGGCACAATTAATACGGGTGAAATTCGCGGTGAGTTCTTGCGTGTGCTTGATCAAGGTCGAGGCGTGGATGCAGGTCGTGTGCTAGGTAGTCATCAATCTGACGACTTTGAGGCCCACTATCATCCCCTAACAGCGGTGTCTGGAGGCGCAGCAACGTCACCTTCTTTTCCTAGTGCATTTGCTTCACCATATTTCTCCGGCAATGCGGCTAAACAGAACGATGGTTCATTTGCTAACGCAGGAGCGCTTACATACGGTGCCGCAGGGCAAGGTGCATATCAGAGTCCAGAACAACAGAAATCATCTGGCAATGGTATAGAAACAAGACCACGAAACATTGCTCGTTCTATGGCCATTGTCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c47c4569af3fddff1c377585881fb034125ffcc0b5004dad40436eaea3e74776
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7745
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large phenotypic and genetic diversity of prophages induced from the fish pathogen Vibrio anguillarum Andersen,N., Castillo,D., Kalatzis,P. and Middelboe,M. — — GenBank