Phage RBP Database

Genbank accession

GENB_5ffb483bc9d2 [GenBank]

Protein name

tail spike protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

Seq2Symm

C3 confidence 0,999

C3	0,999
C1	0,005
C2	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MTTYATGNPLGSKDTRDLYDNAENFDAAMNDLVNTTWNDRFGVSRPTMKGYEEQFNGWLDAQGFEPGVLEYVDGSPLTVDRPTQLIQRDGNLYSVKRPASFPVNLTGNWATDQSLLVIQVDQGFPQEIGRGVRRVDSVADLRAIAGRFAGDAALVVGYYAETPGVGGGEFHWDSTSTEDDNGGSIIQATGITTGRWKRDITHGVWAEWFGARNDGSDAAGTTAAVWAAIIALRHDPETIVQYIGGPTVTAYASGRLNFGNGVFALQPDSFDITQDLGLTIVGQGFRGKNQAMKAATTLVVRGTSSGFFFRHYGNGGRNLTFNNIDVVYDDSQFTGDIIETTSSPGLTLQRVRVGCYGGFLASRLTTARSCIRATFDEFIRCEDVVLDGAQYGFYSDGTITVPGLSFGGWGTTFLNCTFYDFVKSLVLHAGNRTRHSLNIIASYFNPINTSPERCHDIDNVEGLVIDGCQHTPSTGSQPSQEWFRVLGSTGRISCNTFAGLSSKLGTIGGTNPSAIEWSNNRVSCQGGLTITGGVVRGGGNEYSNADHSVDIAPVAIISLDIGPDIHKVGVTGYSYRIAADSSMLSGRVNYSFEQDNSNSKYYSASTRVGMSNCDSRFITLATAGTTLSPYNAGRTYYVTVAGTQTLPAPIPGAAPIRILKSGANALTITTTSGTNFLIGASGSRTSAVATPAEVGTLIEFEPLTSTAWVGRVLSGTWSFT

Physico‐chemical properties

protein length:	720 AA
molecular weight:	76976,45640 Da
isoelectric point:	5,19766
aromaticity:	0,10000
hydropathy:	-0,16972

Domain architecture

GENB_5ffb483bc9d2

1 720 aa

RBD 134–200 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR059934
RBD

IPR059934

GENB_5ffb483bc9d2

1720 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1559
ATT

DC_1559 DC_0743

GENB_5ffb483bc9d2

1720 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR059934	RBD	DC_0541	134	200	InterPro cluster	Phage tail protein-like, small four-stranded beta-sheet domain	C-terminal	Low	Positional only	683 proteins / 690 hits

Proteins with similar domain architecture

Phage

Pseudomonas phage F_ET2439sp/ET602 [NCBI] · taxon 1542101

Uroviricota Caudoviricetes Pseudomonas phage F_ET2439sp/ET602

Host No host information

Genbank protein accession

KM389324.1_CDS_[21687..23849] [NCBI]

Genbank nucleotide accession

KM389324.1 [NCBI]

CDS location

range 21687 -> 23849
strand +

CDS

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)