Protein

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Genbank accession
YP_009614831.1 [GenBank]
Protein name
Hoc-like head decoration
RBP type
TF
Evidence RBPdetect2
Probability 0,50
Seq2Symm
C1 confidence 0,999
C1 0,999
C2 0,004
C3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAFTVDITPKTPTGVIDQTQQFTATPSGQTGDGPITYAWTVDDVPQDGAEATFNYVLKGPAGQKTIKVVATNPVPDTDAETAEATTTITVQNKTQTTTLAVTPDSPSAGVIGTPVQFTAALASQPPGASATYQWHVDGSPVGEATSTTFNYTPTTSGVKTIKCVAQVTATDYDAKEVTSNEVSLTVNKKTMNPQVTLTPPSINVQQDASATFTANVTDAPEEAQIAYSWKKDSSPVEGSTNVYTVDTSSVGSQTIEVTAVVTADDYDSKTITAEGQVQVTDKVAPEPEGELPYVHPLPHRSSAYIWCGWWVMDEIQKMTEEGKDWKTEDPDSKYYLHRYTLQKMMKDYPEVDVQESRNGYIIHKTALETGIIYTYP
Physico‐chemical
properties
protein length:376 AA
molecular weight: 40636,40400 Da
isoelectric point:4,44472
aromaticity:0,07979
hydropathy:-0,45479

Taxonomy

Phage
Shigella phage Sf22 [NCBI] · taxon 2024320
Uroviricota Caudoviricetes Pantevenvirales Straboviridae Tequatrovirus Tequatrovirus sf22
Host
Shigella flexneri [NCBI] · taxon 623
Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella flexneri

Coding sequence (CDS)

Genbank protein accession
YP_009614831.1 [NCBI]
Genbank nucleotide accession
NC_042039 [NCBI]
CDS location
range 52594 -> 53724
strand -
CDS
ATGGCTTTTACAGTTGATATAACTCCTAAAACACCTACTGGAGTTATAGATCAGACTCAGCAGTTTACTGCTACACCCAGTGGTCAAACTGGAGATGGACCTATTACATATGCTTGGACTGTAGATGATGTTCCACAAGATGGAGCTGAAGCAACTTTTAATTATGTATTAAAAGGACCTGCCGGTCAAAAGACTATTAAAGTAGTTGCAACAAACCCAGTCCCAGATACTGATGCTGAAACAGCAGAAGCTACTACAACTATCACAGTTCAAAATAAGACACAGACAACTACCTTGGCAGTAACTCCCGATAGTCCTTCAGCTGGAGTAATTGGAACCCCAGTTCAATTTACTGCTGCCTTAGCTTCTCAACCACCAGGCGCATCTGCTACGTATCAATGGCACGTTGACGGTTCTCCTGTAGGCGAAGCAACTTCTACTACATTCAATTACACTCCTACCACAAGCGGAGTTAAAACAATTAAGTGTGTGGCTCAAGTAACCGCGACAGATTATGATGCAAAGGAAGTTACTTCTAATGAAGTATCATTAACAGTTAATAAGAAGACAATGAATCCACAGGTTACATTGACTCCTCCTTCTATTAACGTTCAACAAGATGCTTCGGCTACATTTACTGCTAATGTCACTGATGCTCCAGAAGAAGCGCAAATTGCGTATTCATGGAAGAAAGATTCTTCTCCTGTAGAAGGGTCAACTAATGTATATACCGTTGATACTTCATCTGTTGGAAGTCAAACTATTGAAGTGACTGCCGTCGTTACTGCAGATGACTATGATAGCAAAACTATTACAGCAGAAGGTCAAGTTCAGGTAACTGATAAAGTTGCTCCGGAACCAGAAGGTGAATTACCTTATGTTCATCCTCTTCCACACCGTAGCTCAGCTTACATCTGGTGCGGTTGGTGGGTTATGGATGAAATTCAAAAAATGACTGAAGAAGGTAAAGATTGGAAAACTGAAGATCCAGATAGTAAATACTACCTGCATCGTTACACTCTTCAGAAGATGATGAAAGATTATCCAGAAGTTGATGTCCAAGAATCGCGTAATGGATACATCATTCACAAAACTGCTTTAGAAACTGGTATCATCTATACCTATCCATAA

Genome Context

Tertiary structure

YP_009614831.1
ESMFold2 structure
Source ESMFold2
pLDDT 82.6
Oligomeric state monomer
Download structure