Phage RBP Database

Genbank accession

SMH63904.1 [GenBank]

Protein name

major tail protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,81

Protein sequence

MHLPNGSQIFIGVNMGEPISATDISNAKDPVFTVSNSQQIKKGAYVLIETSSWGKLVSRVLRVKEVSDNASVTLEGVDTTDQNVFPAGSNTATFREVKSWVEVPCVQDLAQDGGEQQYYTYQCLADDQEQQLPTYKSAVSLTYTFAHEYDNPIYPILREAEESGDVTALRMYVPKAKEMRCWAGVLSFNDIPQTTMNEMETVSLSVSLKGRFTFLPSDVK

Physico‐chemical properties

protein length:	220 AA
molecular weight:	24441,17460 Da
isoelectric point:	4,67975
aromaticity:	0,09091
hydropathy:	-0,30727

Domain architecture

SMH63904.1

1 220 aa

TAS 51–215 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR014918
TAS

IPR014918

SMH63904.1

1220 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0037
ATT

DC_0037

SMH63904.1

1220 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR014918	TAS	DC_0660	51	215	InterPro cluster	Phage tail tube protein 3	Central	High	Text match	170 proteins / 170 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

SMH63904.1

1 220 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	59	59	0,4855
Central domain	60	209	151	0,0581
C-terminal	210	220	10	0,5783

Note: Constraints were applied during segmentation.
Fixed 29 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Escherichia phage vB_EcoS_swan01 [NCBI] · taxon 2496549

Uroviricota Caudoviricetes Drexlerviridae Warwickvirus Warwickvirus ityhuna

Host No host information

Genbank protein accession

SMH63904.1 [NCBI]

Genbank nucleotide accession

LT841304 [NCBI]

CDS location

range 17734 -> 18396
strand -

CDS

ATGCACTTGCCTAATGGTTCTCAAATTTTCATCGGCGTTAATATGGGTGAGCCAATTAGCGCTACTGATATTTCAAACGCTAAAGATCCGGTTTTTACTGTTAGTAATTCACAGCAGATCAAAAAAGGTGCTTATGTTCTGATTGAAACGTCTTCCTGGGGTAAACTGGTTAGTCGTGTGTTGCGGGTAAAAGAAGTATCTGATAACGCAAGCGTAACTCTTGAAGGTGTAGACACAACCGATCAAAACGTATTTCCGGCTGGTTCTAATACAGCAACTTTCCGAGAGGTGAAATCTTGGGTAGAGGTTCCTTGCGTACAGGATCTTGCTCAGGACGGCGGCGAGCAACAGTATTACACTTATCAGTGTTTGGCTGATGACCAGGAACAGCAGTTGCCGACCTACAAGAGCGCCGTTTCTCTTACCTATACTTTCGCGCATGAATATGATAATCCGATTTATCCGATCTTGCGCGAGGCTGAGGAATCCGGCGACGTAACCGCTTTGCGTATGTACGTGCCGAAAGCTAAAGAGATGCGTTGCTGGGCTGGCGTATTGTCTTTTAATGACATTCCGCAAACAACTATGAACGAAATGGAAACTGTTTCCCTTTCTGTATCTCTGAAAGGCCGATTCACGTTCTTACCTTCCGACGTTAAGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)