Phage RBP Database

Genbank accession

CAM0079341.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,59

Protein sequence

MAPVVIAIAVGAAATAVGVTTVMAITLAVAAASLYMVATMDIPKTPGTDPSTAKQTIRTPNQPCRGVFGTAMLGGPLAFAEEYLHKSGYEESYETCRYQGSGSDNSGGRYQCTTKTRWIDTSAKWLHLVVVLANHRCQDVPEVYFGDEKQTDWNHEYWKIHVLKGTQTKISDLPPMLTAVPSWTDTMIGKGLTYVHVALRHSATHFPNGIPGIKCLVKGQLLTTPFFNGFGNNAAACIYHYLRYEFGATAKMINTASFSNEFKICNEVIPSEASNSVALPIRYAIDGAYDYDESHDNVLKKMLSACGGSLIFTNGQYHLQVAAYRGPITSKQIISLSDLNGPVNIIPETALNDRVNTINGQYLEPENGYLQTDFTPVTVPEYVTEDGGERTYDADLEFVTNKHQAHRLANIILKDNRYGLTMRVPMNLRGFKFNAGLLVGFDEKTLGYDDLEFRVTSWKLDPKGGVELVLKQTAADIYDDSTAPVQTKPTDSQLPDPKFCYPVERLTFDVFEDDGVYDGMLWWSHPDLDNIREFEIVATSTGGEIFRVNVGKDTEYRLQNMRGVEYRIVLTAYNRYGAPSLPVAITTKVGDPKPVTGVVFEPDNFEMVIRPTVSGVLPQNTRFWFFRANTSVPDKSDITKIGEGVTFTDTGLIPNTAYHYYVQPLNSSAMGELFGPYGTQTTDNPDDIYDLIKDEIPGTFTWVVYATDVFGAGISKTFDPAIHKFEGRAYNKDVEEPSLNPLDYTFFRIGDFITDAEQDILDNLAQGKTPDGTDDLVGEVAVKTIAAQEVNALKVLADWVTAKNLSAGAVTADKIAVTVVSPVNNFSEFNNLRGWTIPSDASLVEEARLKGNLVTTVKLVSGSVDKSATCDKFTVDQSSIYEVRISIYSDQATAATEHQFSMQAFDKDGTAVDVEAFHAKTRRSAGYTATKSLTFWKGSTSGGLWRHMVVYVLGSNADINAMPECSNVTYFCKVHPGVRKINLSATVLGSGNQRDLHVYSPSVVSVGSGVISASIIRAGALITAPLIKGGRVEGGVIKGGRIEGATGDFEGTVKVGKLIGGVGLTSHSLLSVGSTTWGVGTGVQARNYFNRNARFIIPKEDFARKGVLTISVANYSVVAGARDLRYLTLQGPSGKNSMNVFVSPFGYVNNSTSLVDLAPHGIKLSSSSPKLVMPGSNGEFTGQTIQVGISIAASASTGNHDFRLALGLFTGNTKVNSWFNLSMGNVTYDLVLDKDNSDIRISN

Physico‐chemical properties

protein length:	1243 AA
molecular weight:	135234,02130 Da
isoelectric point:	5,62282
aromaticity:	0,09574
hydropathy:	-0,14537

Domain architecture

CAM0079341.1

1 1243 aa

ATT 297–456 · STR 502–683 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR032876
ATT

IPR032876 IPR003961

IPR036116
STR

IPR036116

CAM0079341.1

11243 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0187
STR

DC_0187 DC_2102

CAM0079341.1

11243 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR032876	ATT	DC_0307	297	456	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR003961	STR	DC_0003	502	587	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	521	683	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

CAM0079341.1

1 1243 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	1051	1051	0,6375
Central domain	1052	1232	182	0,0104
C-terminal	1233	1243	10	0,9524

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Vibrio phage K405 [NCBI] · taxon 3105685

Viruses

Host No host information

Genbank protein accession

CAM0079341.1 [NCBI]

Genbank nucleotide accession

OZ196577.1 [NCBI]

CDS location

range 63857 -> 67588
strand -

CDS

ATGGCTCCCGTTGTTATCGCAATCGCCGTTGGTGCGGCGGCCACCGCAGTAGGTGTGACTACTGTAATGGCGATCACCCTAGCCGTTGCTGCTGCCTCGTTGTACATGGTAGCGACAATGGATATCCCTAAAACTCCCGGCACTGACCCGTCTACCGCTAAGCAGACCATACGGACGCCTAACCAGCCCTGTCGGGGAGTCTTCGGCACGGCTATGCTTGGTGGCCCGTTAGCATTTGCTGAAGAGTATTTACACAAAAGCGGTTATGAAGAGAGCTATGAGACTTGCCGTTATCAAGGTAGTGGCAGCGACAATAGTGGTGGAAGATATCAGTGTACTACTAAGACCCGTTGGATAGATACCAGTGCCAAGTGGCTACACTTAGTTGTCGTTCTGGCTAACCACCGCTGCCAAGACGTGCCTGAAGTTTACTTCGGTGACGAGAAGCAAACAGACTGGAATCATGAGTACTGGAAGATTCACGTACTAAAAGGTACGCAGACTAAAATTTCAGATTTGCCTCCTATGTTAACTGCTGTGCCGTCTTGGACAGATACGATGATCGGCAAGGGTTTGACTTACGTTCACGTAGCGCTTCGTCACAGTGCCACGCACTTCCCTAATGGTATACCGGGCATCAAGTGTTTGGTTAAAGGGCAGTTGCTTACGACTCCGTTCTTCAACGGCTTTGGCAACAATGCTGCCGCGTGTATTTATCATTACTTACGTTATGAGTTTGGTGCCACGGCCAAAATGATAAACACGGCTTCGTTCTCTAACGAGTTCAAGATTTGTAATGAGGTTATCCCTAGCGAGGCCAGCAATAGTGTAGCTCTACCTATCCGTTACGCCATTGACGGAGCTTATGACTACGATGAGAGCCACGACAACGTTCTAAAGAAAATGCTGTCAGCGTGTGGAGGTAGCCTAATATTCACTAACGGGCAATACCACCTTCAGGTTGCCGCGTACCGTGGGCCGATAACCAGTAAGCAAATTATATCGTTATCCGATCTTAACGGGCCAGTAAACATCATACCTGAGACAGCTCTAAACGATCGTGTGAACACAATTAACGGTCAGTACTTGGAGCCTGAAAACGGATACTTGCAGACAGACTTTACACCAGTAACTGTGCCTGAGTATGTTACTGAAGATGGTGGTGAGCGAACTTACGATGCTGACTTAGAGTTTGTCACTAACAAGCACCAAGCACACAGACTAGCTAACATCATCTTAAAGGATAACCGCTACGGTCTCACCATGCGAGTACCTATGAATCTGAGGGGGTTCAAGTTCAATGCTGGACTTCTGGTTGGCTTTGATGAGAAGACGCTAGGCTATGACGATCTTGAGTTCCGCGTTACCTCTTGGAAACTGGACCCTAAAGGCGGTGTTGAGCTTGTTCTTAAACAGACAGCGGCTGATATCTATGATGACTCTACTGCACCTGTTCAGACTAAGCCTACAGACTCACAGTTACCAGACCCTAAGTTCTGTTACCCCGTAGAGCGCCTAACGTTTGACGTGTTCGAAGACGATGGCGTGTATGACGGAATGCTTTGGTGGTCTCATCCAGACTTAGACAACATCCGTGAGTTTGAGATTGTTGCTACTTCTACGGGCGGTGAGATCTTCAGAGTGAACGTAGGTAAAGATACAGAGTACCGACTTCAGAACATGCGTGGTGTTGAGTACCGTATTGTCTTGACAGCGTATAACCGTTATGGCGCACCATCTTTACCAGTGGCTATCACTACCAAAGTGGGAGATCCTAAACCTGTTACTGGTGTGGTATTCGAACCTGACAACTTTGAAATGGTTATACGCCCTACCGTGTCCGGTGTGTTGCCTCAAAATACAAGGTTCTGGTTCTTTAGAGCTAATACCTCTGTACCTGACAAAAGCGATATTACAAAGATCGGTGAAGGTGTGACGTTTACTGATACAGGGCTTATACCTAACACGGCTTACCACTATTATGTTCAGCCACTTAATAGTTCTGCTATGGGCGAGTTGTTTGGCCCATACGGTACTCAGACTACTGATAACCCTGACGACATCTATGACCTAATCAAAGATGAAATACCGGGGACTTTCACTTGGGTGGTCTACGCTACTGACGTGTTTGGTGCGGGTATTTCAAAAACTTTTGACCCTGCTATTCATAAGTTCGAAGGTCGCGCATATAACAAGGACGTAGAAGAACCTAGCCTTAACCCGCTTGATTACACGTTCTTCCGTATCGGTGATTTCATTACTGACGCCGAACAGGATATCCTCGATAACTTGGCACAGGGTAAGACACCTGACGGCACGGATGATCTAGTAGGTGAGGTTGCAGTTAAGACAATTGCTGCTCAAGAAGTTAACGCGCTTAAAGTGTTGGCTGATTGGGTAACCGCCAAGAACCTTTCTGCAGGTGCGGTGACGGCTGATAAGATTGCTGTGACCGTAGTTTCGCCAGTAAACAACTTCAGTGAGTTTAATAACCTTCGTGGTTGGACAATACCTTCTGACGCCAGCCTAGTAGAAGAGGCGAGACTAAAAGGGAACCTTGTTACTACAGTTAAGCTCGTCAGCGGAAGCGTAGATAAATCGGCTACTTGTGACAAGTTCACGGTAGACCAAAGCTCTATCTATGAGGTTAGAATTTCCATCTACAGCGATCAAGCTACTGCGGCCACTGAACATCAATTCAGTATGCAAGCTTTTGACAAAGACGGTACGGCTGTAGACGTAGAAGCCTTTCACGCAAAGACCAGAAGGTCTGCAGGGTACACAGCTACTAAGTCCTTGACCTTTTGGAAAGGGTCAACTTCAGGTGGGTTGTGGAGACACATGGTGGTCTATGTCTTAGGCTCCAATGCTGACATCAACGCAATGCCTGAGTGTAGTAACGTAACTTACTTCTGTAAGGTTCATCCCGGTGTTAGAAAAATTAACTTGTCAGCTACTGTTCTTGGCAGTGGCAACCAGCGTGATCTTCACGTCTACTCTCCTTCAGTTGTCTCAGTGGGTAGCGGTGTTATTTCTGCATCTATAATTCGTGCAGGCGCTCTTATAACTGCACCGCTTATAAAAGGTGGTAGGGTTGAAGGTGGAGTAATAAAAGGCGGCAGGATTGAAGGTGCAACGGGAGACTTCGAAGGTACTGTAAAAGTCGGTAAGCTGATTGGTGGTGTTGGTTTAACCAGTCACAGCTTGCTATCGGTTGGGTCTACTACTTGGGGTGTTGGTACGGGGGTGCAAGCCCGTAACTACTTCAACAGAAACGCTCGATTTATCATACCTAAAGAAGACTTTGCGCGTAAAGGCGTCCTCACTATATCTGTGGCTAACTACAGCGTAGTAGCAGGTGCAAGAGACCTTCGATACTTAACCTTGCAAGGGCCTTCAGGCAAAAACTCAATGAACGTGTTTGTTAGTCCATTCGGTTACGTAAACAACAGTACTAGTTTAGTGGACCTTGCCCCTCATGGTATTAAGCTTTCTTCTAGTTCACCTAAACTAGTAATGCCTGGCTCTAATGGTGAGTTCACAGGGCAGACTATACAAGTAGGCATAAGCATCGCGGCCAGTGCTTCCACCGGTAATCACGACTTCAGACTAGCCCTTGGCCTCTTCACTGGTAACACTAAAGTTAACTCGTGGTTTAATCTGTCTATGGGTAATGTCACTTATGACCTTGTGCTGGACAAAGACAACTCAGACATAAGAATCAGCAACTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)