Protein

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Genbank accession
QCW19670.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,76
TF
Evidence Phold
Probability 1,00
Protein sequence
MANQDTDLRCYLTNAGIAAENNSIQLGRKLPVKEMVFGSGLLADGSDPRLQTTMIQEEYAVPCGMLFDPESPTLLVFKSDLPADVGGFHIHEVAIRLEDGTLYGYARGKGDYKPTIEQGATDSVRYAVEMYTTNASNVECKVDLSKVYVDWEDLEVAMKKAEDDLSAHAGAPNPHPQYAMSANTQFLPYDPTRIYSVGEVCYTKAANGKVTYWEWYSNVESLAGKDPLNTANRRIGWANVTKPFYWKPYMPKVAGETMSWDTDTIPENMVVGIGQQLPKAVYHSLATAKPEWIDATDNSLINIPDRQGRFVRAADGTTWLVGQTHEDAIRNITGSVRSFYGSNVVSAGAMREEIYGNSPAKVGVIGGDPGANYTIGFDASRVVPTAAENQPKAFIEWVGYAL
Physico‐chemical
properties
protein length:402 AA
molecular weight: 44097,97890 Da
isoelectric point:4,90420
aromaticity:0,09950
hydropathy:-0,33806

Domains

Domains [InterPro]
IPR022225
8–148
IPR022225 SSF88874
QCW19670.1
1 402
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Va_90-11-286_p16
[NCBI] 		2565519 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW19670.1 [NCBI]
Genbank nucleotide accession
MK672802.1 [NCBI]
CDS location
range 12900 -> 14108
strand +
CDS
ATGGCTAATCAAGATACAGACTTGCGCTGCTATTTAACGAATGCAGGGATTGCAGCAGAAAACAACTCGATCCAACTAGGTCGAAAGCTACCCGTGAAAGAAATGGTGTTTGGTAGCGGGCTGCTTGCTGATGGAAGTGACCCTCGCTTGCAAACCACTATGATTCAAGAAGAGTACGCCGTTCCATGCGGTATGCTGTTTGACCCTGAAAGCCCAACACTATTAGTATTTAAGAGTGATTTACCTGCAGATGTAGGCGGCTTTCATATTCATGAGGTGGCGATCCGCTTAGAAGACGGCACACTTTACGGTTACGCTCGCGGAAAAGGGGATTACAAGCCAACCATAGAGCAAGGTGCTACCGATTCGGTTCGCTATGCCGTGGAAATGTACACAACCAACGCGAGCAATGTTGAGTGCAAAGTTGATCTATCAAAAGTGTATGTTGATTGGGAAGATCTGGAAGTGGCAATGAAAAAGGCTGAGGATGATTTATCTGCGCACGCAGGTGCTCCTAACCCACATCCACAGTACGCCATGTCTGCAAATACGCAATTCCTGCCTTACGATCCAACACGTATCTACTCAGTAGGCGAAGTCTGCTACACCAAAGCCGCAAACGGAAAAGTTACATATTGGGAATGGTACTCAAATGTAGAGTCGTTGGCGGGTAAAGATCCACTAAATACAGCTAACCGACGCATTGGTTGGGCGAATGTAACCAAGCCATTCTACTGGAAGCCCTACATGCCAAAAGTAGCCGGTGAAACTATGTCTTGGGATACTGACACAATTCCAGAAAATATGGTGGTAGGCATAGGTCAACAATTGCCTAAAGCCGTGTATCACTCGCTCGCAACCGCAAAGCCTGAATGGATTGATGCAACGGATAACTCCTTAATCAATATCCCGGATCGACAAGGGCGCTTTGTTCGTGCGGCTGACGGTACTACGTGGTTGGTGGGTCAAACTCACGAAGATGCGATTCGGAACATTACTGGTTCAGTTCGTTCATTTTACGGATCAAATGTTGTTAGTGCTGGGGCTATGAGGGAGGAAATTTACGGAAACAGTCCGGCTAAGGTGGGGGTAATAGGTGGCGATCCGGGTGCTAACTATACTATAGGTTTTGACGCATCAAGAGTTGTTCCTACTGCCGCCGAAAACCAGCCTAAAGCCTTTATTGAATGGGTAGGATACGCACTATGA

Tertiary structure

PDB ID
44aaca3196c83552ec02a2284defe603385c903bbe4fac893905dd22bb3cb574
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8219
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Large phenotypic and genetic diversity of prophages induced from the fish pathogen Vibrio anguillarum Andersen,N., Castillo,D., Kalatzis,P. and Middelboe,M. — — GenBank